Protein

View in Explore
Genbank accession
XSB41399.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,94
TF
Evidence Phold
Probability 1,00
Protein sequence
MSVVVSGTLKSPDGQVVSDANITLTALTVSPDALSGTSASAVTTSTGYYGMTMEPGEYAVSVTVRGKTAVYGRVRIEGTESTVTLNMLLRRSLVEVSIPGELLTDFRQIQNNVADDLATIRRLNEDTAVKNNQASQSKESAAASAKTASESAKAATSKATESAQKASEAAEAATRAGESEKAAAADAKEARRHAETARVAQEAAGDVLKRAEAATVSAEEARRMAENARGPKGDTGPKGDAGPRGETGPAGPRGEKGEQGERGPQGIPGQKGDTGERGPQGVQGPAGPRGATGPQGAMGPRGETGARGEKGDPGGPQGPKGDTGPRGEPGPKGDTGPRGEAGPPGPQGPAGQTGPKGDKGEPGATGPAGPAGPRGETGPAGPAGPAGSVASVPDASTSQKGVVQLSSDTNSDDETKAATPKAVKAVMAEVQAAKTKAEEAATRAAVPGPKGDRGEPGAPGAVGPAGPRGPAGAAGPKGDAGPAGPAGKDGTAGAEGKAGPAGPRGERGPAGAQGVPGPVGPAGPAGKTGPQGPAGGRGPMGPPGLDGKTGPQGPQGPTGRLVPGEIYSIGTYIIAALAPYTTDIGRTYQPGETVQGSRLKRCAIIKDASGNYMKANTDGIDGNLSSVPGSWMVCNEITSTNDNEGIGLFQRAY
Physico‐chemical
properties
protein length:653 AA
molecular weight: 64140,79150 Da
isoelectric point:6,76409
aromaticity:0,01991
hydropathy:-0,65681

Domains

Domains [InterPro]
G3DSA:2.60.40.1120
5–97
G3DSA:2.60.40.1120 PTHR24637 IPR008160 IPR005068 IPR008160
IPR008969
5–93
IPR008969 Coil IPR008160 G3DSA:1.20.5.320 Coil
XSB41399.1
1 653
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage PhiR5_2
[NCBI] 		3416468 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XSB41399.1 [NCBI]
Genbank nucleotide accession
PV340546.1 [NCBI]
CDS location
range 34951 -> 36912
strand +
CDS
GTGAGTGTTGTTGTTTCGGGGACGCTGAAATCGCCTGATGGTCAGGTTGTATCAGATGCGAACATTACGCTGACGGCGCTGACTGTTTCACCGGATGCACTCAGTGGCACCAGCGCGTCGGCAGTCACCACGTCAACAGGCTATTACGGCATGACGATGGAGCCGGGGGAGTATGCGGTTTCAGTGACGGTGAGAGGGAAGACTGCTGTCTACGGACGTGTGCGTATTGAGGGGACTGAAAGTACGGTGACGCTCAATATGCTGTTACGCCGCAGTCTTGTTGAGGTGAGCATACCCGGAGAACTGCTGACAGATTTCCGGCAGATACAGAACAATGTGGCGGATGACCTTGCCACGATTCGTCGTCTGAACGAAGACACGGCGGTGAAAAATAATCAGGCTTCACAGTCGAAGGAAAGCGCTGCTGCCAGTGCGAAGACTGCATCAGAAAGCGCGAAGGCTGCGACCAGCAAAGCGACGGAGTCTGCACAAAAAGCCAGTGAGGCTGCAGAGGCGGCGACCCGGGCAGGTGAGTCTGAAAAGGCAGCGGCAGCTGACGCTAAAGAGGCCAGACGACATGCTGAAACCGCCAGAGTGGCTCAGGAGGCCGCCGGAGACGTTCTTAAACGTGCTGAGGCTGCTACGGTTAGTGCTGAAGAAGCCAGACGTATGGCAGAGAATGCACGAGGACCTAAAGGCGATACAGGGCCGAAAGGTGATGCTGGTCCTCGTGGTGAAACAGGTCCGGCGGGTCCGCGTGGGGAGAAAGGTGAGCAGGGAGAGCGCGGACCTCAGGGCATACCGGGCCAGAAAGGTGATACAGGAGAACGGGGACCTCAGGGAGTGCAGGGGCCAGCTGGCCCACGTGGTGCGACCGGGCCACAGGGAGCAATGGGGCCGCGTGGTGAAACCGGGGCCAGAGGCGAAAAAGGAGACCCGGGGGGGCCTCAGGGACCAAAGGGGGATACTGGTCCGAGAGGTGAGCCGGGGCCGAAAGGTGACACCGGCCCACGTGGAGAGGCCGGACCACCCGGACCACAGGGTCCGGCAGGGCAAACCGGCCCTAAAGGGGATAAAGGTGAACCCGGCGCAACAGGTCCGGCAGGTCCCGCAGGCCCTCGGGGAGAAACCGGCCCCGCAGGTCCTGCGGGTCCCGCAGGCAGTGTCGCCAGTGTTCCGGATGCCAGCACATCACAGAAAGGTGTTGTACAGCTGAGCAGCGATACCAACAGCGATGATGAAACAAAAGCGGCAACCCCAAAGGCTGTGAAAGCGGTAATGGCAGAAGTGCAGGCAGCAAAAACGAAGGCAGAAGAGGCAGCAACCCGGGCAGCAGTCCCCGGACCGAAGGGGGACAGGGGGGAACCTGGCGCACCTGGTGCAGTGGGGCCCGCAGGCCCACGGGGACCGGCTGGTGCAGCTGGTCCCAAAGGTGATGCAGGCCCGGCAGGCCCCGCAGGAAAGGATGGTACCGCCGGAGCGGAAGGTAAGGCAGGTCCGGCAGGGCCACGAGGTGAAAGGGGACCAGCGGGGGCACAGGGTGTTCCGGGGCCGGTTGGTCCGGCAGGTCCTGCGGGTAAAACGGGGCCACAGGGCCCTGCCGGAGGGCGAGGGCCGATGGGACCGCCCGGGTTGGATGGTAAAACCGGACCACAGGGACCACAAGGGCCAACCGGAAGGCTGGTACCCGGGGAAATTTACAGCATCGGAACATACATTATTGCCGCACTAGCCCCGTATACAACCGACATCGGCAGAACCTATCAGCCAGGAGAAACTGTACAGGGTTCACGCCTTAAGCGATGCGCCATAATCAAAGATGCAAGCGGGAACTATATGAAAGCTAACACCGATGGCATTGACGGCAACCTATCCTCAGTTCCGGGCTCATGGATGGTGTGTAATGAAATTACGTCGACAAATGACAATGAAGGCATCGGGCTGTTCCAGCGCGCATACTGA

Tertiary structure

PDB ID
d9323776af8e744e7dcdb99e9ad7bb7267aba325613f6c3258a861d42f9f884d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6501
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
E. coli prophages encode an arsenal of defense systems to protect against temperate phages Brenes,L.R. and Laub,M.T. 2025 — GenBank