Protein

View in Explore
Genbank accession
YP_010658487.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MAELPLINAIPRFKGNENRVDKLVNGTALETWQTSEGVTLPTFAKFLADKDEEISEASDAAEAAAASAASAAASAAIVATYATRAAASAVNLSAYTEVRVNRWSATSHYAPAAYKKVVVEPAHTAKFQSLDGAWWELNDTIVDLRSFGAMQDNVADDSAALILATSFSNKLVIVSNLGSAIKVAGTIPVYGQILGIGNPNFALTVAGGVDRGFDLQSNSVLDGITITRGPTGSSDSGEYNNAFVVGRYVNQLGTLTRNVTVRNIKLIGIDAGVGRRSIAGIYGNVSDSLFENIEIEGWVSYGIMTHWGGVHDEEDPHSSTVTATWHPRRLTFRNIRMHSPQPDAALGVLYLSATHDILVDGLSSDGVRNPITIAPGDVGGVVAQGESVGRILQNILVRNVDINNYEGTGFVISGASGLRAGARWLGINEKMSIRLENITIKRGALSTSGRMIDARLVTNLTIDGYNLSHGSGADSAIYTPGLFIQACNNVKAKGRSHVPMAWEAVGSTNVEIDSQDVCLRTDYQTSAVGGRITAEAGAHSLGAALAVNDTTITLTALNFDIVAGSPIAVGGGYVVASAAAIEQATSIVIPIYPSPVSAASASAATVRKACKRYNLLGSTEGFYYGLHIVNTNSGYTEDVRVSRHFYRNGLHDIYARGTRHLKVDKSTFEACNQIDSASGNNIRFIDTAVGTVVTDCTFEDNLSGTTKCFHNIYLFGNSEGSIVKGNKFHRALTSAINYFLPTGVEMWADLGNNYFASTLAARITGTAIVRGSNVGMRVIGFATAIPTSGTWTKGDILFNEGAAASAGLGWICVTSGAPGTWKSIGTIAA
Physico‐chemical
properties
protein length:829 AA
molecular weight: 87416,12200 Da
isoelectric point:6,04178
aromaticity:0,07720
hydropathy:0,04632

Domains

Domains [InterPro]
IPR012334
128–517
IPR012334
IPR011050
133–489
IPR011050
IPR011050
450–768
IPR011050
YP_010658487.1
1 829
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_X2_28B
[NCBI] 		2836086 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010658487.1 [NCBI]
Genbank nucleotide accession
NC_070857.1 [NCBI]
CDS location
range 62016 -> 64505
strand -
CDS
ATGGCTGAACTTCCCCTTATCAATGCTATTCCTCGTTTTAAGGGGAATGAAAATCGAGTTGATAAACTTGTTAATGGTACAGCATTGGAGACTTGGCAAACGAGTGAGGGGGTAACACTCCCTACCTTTGCTAAGTTTCTTGCTGATAAAGATGAAGAAATTAGTGAGGCATCTGATGCTGCTGAAGCTGCGGCAGCGTCTGCCGCTTCTGCTGCTGCCAGTGCTGCAATAGTTGCCACTTATGCAACTCGTGCTGCTGCTTCTGCTGTAAATCTTTCAGCTTACACTGAGGTACGTGTTAATCGTTGGTCTGCTACCTCTCATTATGCTCCAGCAGCATATAAGAAGGTTGTTGTTGAACCTGCTCATACAGCTAAATTTCAAAGCTTGGATGGGGCATGGTGGGAACTGAATGATACCATTGTGGATCTTAGATCCTTTGGTGCTATGCAGGATAATGTTGCAGACGACAGTGCTGCACTCATCCTTGCTACCTCATTCAGCAATAAACTAGTGATTGTTTCCAACCTTGGCTCTGCAATCAAGGTAGCTGGAACAATTCCAGTCTATGGACAGATCCTTGGTATTGGAAATCCTAACTTTGCTCTCACTGTAGCTGGTGGTGTAGATCGAGGTTTTGACCTTCAATCAAACTCCGTTCTTGATGGGATCACGATTACTCGTGGACCCACAGGAAGTTCTGATTCTGGCGAATATAATAACGCCTTTGTTGTTGGTCGTTATGTGAACCAGCTAGGGACTCTCACCCGTAATGTTACTGTTCGCAACATCAAACTTATTGGTATTGATGCTGGTGTAGGTCGCCGTAGCATTGCTGGTATTTATGGTAATGTTAGCGATAGCCTCTTTGAGAACATTGAGATTGAGGGTTGGGTATCCTACGGAATCATGACCCATTGGGGTGGTGTTCATGATGAGGAGGATCCACATTCCTCTACAGTTACTGCAACATGGCACCCACGTCGTTTGACGTTCCGCAACATTCGTATGCACAGTCCACAGCCTGATGCTGCTCTAGGCGTACTCTATCTTTCTGCTACCCATGACATCCTAGTCGATGGGCTGTCCTCGGATGGAGTTCGAAACCCAATCACCATTGCTCCAGGTGACGTTGGTGGTGTTGTTGCTCAAGGTGAGAGTGTAGGACGTATCCTTCAGAACATCCTGGTTCGTAATGTCGATATCAATAATTACGAGGGAACAGGATTTGTAATCTCTGGTGCTTCTGGTTTGCGAGCTGGTGCTCGTTGGCTTGGTATCAATGAGAAGATGTCCATTCGTCTTGAGAATATCACCATCAAGCGTGGTGCTCTCAGTACATCAGGACGAATGATTGATGCTCGTTTGGTCACCAATCTGACCATTGATGGGTATAATTTAAGCCATGGTTCTGGTGCAGATTCTGCTATCTATACCCCAGGTTTGTTCATTCAAGCTTGTAACAATGTGAAAGCTAAAGGCAGATCCCATGTTCCTATGGCTTGGGAAGCTGTGGGTTCTACAAATGTAGAGATTGATTCTCAAGACGTGTGCTTGCGTACTGATTATCAAACCTCTGCTGTAGGTGGTCGTATTACTGCTGAAGCTGGTGCTCATTCTCTAGGTGCAGCACTCGCGGTAAACGATACAACAATCACCCTTACTGCTTTGAATTTTGATATTGTGGCAGGATCACCAATTGCTGTTGGTGGAGGGTATGTCGTTGCATCTGCTGCTGCCATTGAGCAGGCAACTTCAATTGTGATCCCGATTTACCCAAGCCCGGTATCTGCTGCCAGTGCTTCTGCTGCTACAGTACGAAAGGCATGTAAAAGGTATAACCTTCTTGGTTCCACTGAAGGATTCTATTACGGTCTACATATCGTCAATACCAACAGTGGTTACACAGAAGATGTCCGAGTAAGTAGACATTTCTACCGCAATGGTCTTCATGACATTTATGCTCGTGGTACACGTCACCTCAAAGTAGATAAAAGCACTTTTGAAGCTTGTAACCAGATTGACAGTGCATCAGGTAATAACATCCGCTTCATTGATACTGCTGTCGGTACAGTGGTTACTGATTGTACCTTTGAAGATAACCTCTCTGGTACAACAAAATGTTTCCATAACATTTACTTGTTTGGGAACTCTGAAGGATCCATCGTTAAGGGTAATAAATTCCACAGAGCTTTGACTTCAGCTATTAACTATTTCCTCCCAACAGGCGTGGAAATGTGGGCTGATCTAGGCAACAACTATTTTGCCTCTACTCTTGCTGCCCGTATAACCGGAACAGCTATTGTCAGAGGATCTAATGTTGGTATGCGGGTAATTGGTTTTGCAACAGCAATTCCAACATCCGGTACATGGACTAAGGGTGACATTCTCTTCAATGAAGGTGCTGCTGCTAGTGCTGGATTGGGATGGATCTGTGTGACTTCAGGTGCTCCAGGTACTTGGAAGTCTATAGGAACAATTGCTGCTTAA

Tertiary structure

PDB ID
beca16f9199351e6bdeedb8191ec864182ab2accebaeec550d2207d5e10fe38f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7761
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Hidden Diversity and Expansion of Phages in the Symbiotic Bacteria Rhizobium Gonzalez,V., Santamaria,R.I., Bustos,P., Cauwenberghe,J. and Juarez,S. 2017-09-25 — GenBank