Protein

View in Explore
Genbank accession
QJI52991.1 [GenBank]
Protein name
putative structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,68
TF
Evidence Phold
Probability 1,00
Protein sequence
MALVFNLPLTGPDGSVSIVDTSGNTTWQANGDASIQANALYLDGSGDYISTPTDDRFYIGSGTFEIAFDLNVLAVDAGSFLIIIDQLNTSSSLSSWQVYLYEGRLYFQAYSTSVGDQTVVSSPTSIADGAWHAVIIRKVGQTVSLLIDGNLVASASDGRTYAREPSFVIGARRNFNSTTAFMFRGRLRNFSLDVSPVQLLGVFNRSRVYVQPVGWDRPMRRGDFRRMEFYPVFPVETKRVDGLRITRGVPPWWGAPGSTSVVPTQRLRGRVMQRDADAGEDYPLANVRVALFYRRLHTLIDIRRSDMDGYVVFENLMPGSQAYYAIAFDNDDGVMQNAVIWDRLTPEPGA
Physico‐chemical
properties
protein length:350 AA
molecular weight: 38794,18280 Da
isoelectric point:5,32254
aromaticity:0,11429
hydropathy:-0,12029

Domains

Domains [InterPro]
G3DSA:2.60.120.200
12–201
G3DSA:2.60.120.200
IPR013320
17–191
IPR013320
IPR001791
38–213
IPR001791
IPR001791
39–193
IPR001791
PF13385
43–186
PF13385
QJI52991.1
1 350
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage FoX4
[NCBI] 		2723900 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QJI52991.1 [NCBI]
Genbank nucleotide accession
MT161385 [NCBI]
CDS location
range 36724 -> 37776
strand +
CDS
GTGGCACTGGTGTTCAACCTTCCACTGACGGGGCCTGACGGCTCCGTTTCTATTGTCGATACCTCCGGCAACACGACGTGGCAGGCTAACGGTGACGCGTCGATCCAGGCGAATGCGTTGTACCTGGACGGCTCCGGCGATTACATCAGCACGCCCACTGATGACCGTTTCTACATCGGCTCGGGTACTTTCGAGATTGCGTTCGACTTGAATGTGCTCGCAGTCGATGCCGGCAGCTTCCTGATCATTATCGACCAGTTGAACACCAGCTCATCCCTGAGCAGCTGGCAGGTCTATCTGTACGAAGGGCGGCTCTACTTTCAGGCCTACAGCACCAGCGTTGGCGATCAGACCGTCGTATCAAGCCCGACCAGCATTGCAGACGGCGCGTGGCATGCAGTGATCATTCGCAAGGTCGGCCAGACGGTGAGCCTGTTGATTGACGGCAACCTGGTCGCTTCGGCAAGTGATGGTCGCACCTATGCCCGAGAGCCCTCCTTCGTAATCGGCGCGCGCAGGAATTTCAACAGCACTACGGCCTTTATGTTCCGCGGGCGGTTGCGCAACTTCTCGCTCGATGTGAGCCCCGTGCAGCTGTTGGGCGTGTTCAACCGCAGTAGGGTCTACGTGCAGCCGGTCGGCTGGGACCGACCCATGCGCCGCGGCGACTTCCGCCGCATGGAGTTCTACCCGGTATTCCCGGTCGAGACGAAGCGGGTCGACGGTTTGCGCATCACGCGCGGCGTGCCGCCATGGTGGGGCGCACCTGGATCCACGAGCGTGGTTCCGACGCAGCGCTTGCGCGGCCGGGTGATGCAGCGGGATGCGGATGCGGGCGAGGATTACCCCCTGGCCAATGTGCGCGTCGCGCTGTTCTACCGCCGCCTGCACACCCTCATCGACATCCGGCGTTCCGACATGGACGGCTATGTTGTCTTCGAAAACCTGATGCCCGGCAGTCAGGCCTACTACGCCATCGCATTTGACAACGACGACGGTGTGATGCAGAACGCGGTCATCTGGGACCGACTCACGCCTGAGCCTGGCGCCTAA

Tertiary structure

PDB ID
c062e3e0921caae75651556ea5e489cf7679cb25c37e9d98398d4cbc2d6117d3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7473
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Development of an integrated pest management strategy to control Xanthomonas campestris pv. campestris by using bacteriophages Holtappels,D., Rombouts,S., Lavigne,R. and Wagemans,J. 2022-01-27 — GenBank