Protein

View in Explore
Genbank accession
ALP46863.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,94
TF
Evidence Phold
Probability 1,00
Protein sequence
MSVVISGVLIDGAGIPMSGCHIILKSRVNTSEVVMRTVADVVTGNCGEYGFKAQTGKYCVYLKQDWHDEYCVGDIAVYDDSKPGTLNDFLTALDEGDLKPDVVKRFEEMVAQAQQSAEAAAESERQAGQHVADAQQIKSDCETLADNVQQNAEDVAEDKKQVALLASSATQDAARAEQAVKDADKIVQKAVDKLADAATLTGEAKASAESAAKSEQNAKQHRDEAQRIVDDLKGSNASTTEKGLVQLCSDTDNDSEELAATPKAVKTVMDETKTKAPLDSPAFTGTPTTPTPPDDAVGLETANAAFVRKLLAALVDSSPEALDTLNELAAALGNDPEFATTIMNALAGKQPLSDVLTAISNLEERADNLLCFNQDGNASLSPLSEKARSLLAQATVEAMRNELELKSAAVRDIQTDLYDSTEGRVALPGAFGYGMTDAGATSIIARDMAVIAKSAHNLHPGRYYTFSTQTEEMTGITEIIWLDNGWDDKTSQTATKLVLFFGKDGRILMTVRGDNISAPVTWTNLTPQLGNAAQKDAQEDIYDRTEGRLAIPGMFGFGSLFSSSDRKEFKSGADFLRWVKTAKPGRYTVFADTNVVVPGIQTNGVIEIIWPQPKTSPNDEYAYKIIIYYGVNGHIYYNRCAVASGGGYLVGWENLKVDEASLRALIEARAPLKSPALTGTPTAPTPPDDAAGTEIANAAFVRKLLAALVGSSPEALDTLNELAAALGNDPNFSTTVINALAGKQPLNDVLTAISELSELTQRADNLLYFNQDGNASLSPLSEKARALLALDTPEAMRTEIELKAAATMEAQSDIYDRTAGCLALPGAFGYGHLFSSSEVVYFSAKNGPAEFLKWVFEVTPGRYAVTQYGGSSTSYNPIIAYDMGQPYFRGLVDIDIRYGINSGGIEAEAGRWITFHGDTEYSEGFGEGPAKYQVLVKKSMRPSDLPEAWSRLFWSRNRLMQLLYATENTSKRPPLPGGLVLAAYLPDDGSSEVTLLRAQGVSGSRLRQVVFEAEYRTSGFSAAARSFVYEGTLPGTYVALSGGPDVKFYNRGLVSLFVRIA
Physico‐chemical
properties
protein length:1061 AA
molecular weight: 114026,43510 Da
isoelectric point:4,75108
aromaticity:0,07634
hydropathy:-0,23167

Domains

Domains [InterPro]
IPR013609
1–134
IPR013609 Coil Coil IPR005068
Coil
103–123
Coil
IPR051934
112–395
IPR051934
ALP46863.1
1 1061
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Rac-SA53
[NCBI] 		1759531 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALP46863.1 [NCBI]
Genbank nucleotide accession
KU052037.1 [NCBI]
CDS location
range 47899 -> 51084
strand +
CDS
ATGTCTGTAGTGATATCAGGTGTGCTGATTGATGGCGCAGGCATCCCCATGTCCGGATGCCATATTATTCTTAAATCCCGGGTAAACACCTCAGAAGTGGTGATGCGCACAGTTGCTGATGTGGTGACAGGAAACTGTGGCGAGTACGGTTTTAAGGCGCAGACCGGCAAGTATTGCGTGTATCTGAAACAGGACTGGCACGACGAGTACTGTGTTGGCGACATTGCTGTATACGACGACTCAAAGCCCGGCACGCTGAACGACTTTCTGACTGCCCTTGATGAAGGCGATTTAAAGCCGGATGTAGTGAAACGCTTTGAGGAAATGGTGGCGCAGGCGCAGCAGAGCGCGGAAGCGGCAGCGGAAAGCGAACGACAGGCCGGGCAACATGTCGCTGATGCACAACAAATCAAGAGCGACTGCGAGACGCTGGCGGATAACGTACAGCAGAACGCAGAAGACGTTGCCGAAGACAAAAAACAGGTGGCGCTGCTGGCATCATCTGCCACACAGGATGCCGCCCGGGCAGAACAGGCGGTCAAAGATGCCGATAAGATAGTCCAGAAAGCGGTCGATAAACTTGCTGATGCTGCAACGCTGACCGGTGAGGCAAAAGCCAGCGCCGAATCGGCAGCCAAAAGCGAGCAGAACGCAAAACAGCACAGGGACGAGGCGCAACGGATAGTTGATGACCTGAAGGGAAGCAATGCTTCCACGACAGAAAAAGGCCTGGTGCAACTCTGTAGTGATACAGACAACGACAGCGAAGAACTGGCCGCCACACCGAAGGCCGTCAAAACCGTCATGGACGAGACGAAAACAAAAGCGCCACTGGACAGCCCGGCGTTCACCGGTACGCCAACCACACCAACCCCGCCGGACGATGCAGTCGGTCTGGAAACCGCAAACGCGGCATTTGTCCGCAAACTGCTCGCCGCGCTGGTTGACTCGTCACCGGAAGCCCTGGACACACTGAACGAGCTGGCAGCTGCGCTGGGCAATGACCCGGAGTTTGCGACAACAATCATGAACGCGCTGGCGGGTAAACAACCACTCAGCGACGTGTTAACCGCAATCAGTAATCTGGAAGAACGGGCAGATAATCTTCTGTGCTTTAATCAGGACGGGAATGCTTCACTGTCTCCGCTGTCAGAAAAAGCCCGCTCACTGCTGGCGCAGGCCACAGTGGAAGCCATGCGCAATGAGCTTGAGCTGAAAAGCGCAGCGGTAAGGGATATTCAGACAGACCTTTACGACAGCACGGAAGGCCGCGTTGCGCTGCCAGGTGCATTTGGTTACGGAATGACGGACGCCGGAGCAACTTCAATTATTGCCCGCGATATGGCGGTCATAGCCAAAAGCGCGCATAACCTGCACCCGGGACGGTATTACACCTTTTCCACACAAACGGAAGAGATGACCGGAATAACAGAAATTATCTGGCTGGATAATGGCTGGGACGACAAAACCAGCCAGACAGCAACAAAGCTGGTTCTGTTTTTTGGAAAAGACGGGCGGATACTCATGACCGTTCGTGGCGATAATATCTCCGCCCCGGTCACCTGGACGAATCTGACGCCACAACTTGGCAATGCAGCACAGAAGGATGCACAGGAGGATATTTACGACCGCACCGAAGGCCGACTGGCGATTCCTGGTATGTTCGGCTTCGGGAGCCTGTTTTCCAGCAGCGACAGAAAAGAATTTAAATCAGGGGCTGATTTTCTCCGCTGGGTAAAAACGGCAAAACCCGGTCGTTATACCGTATTTGCGGACACAAATGTGGTAGTGCCTGGCATTCAGACAAACGGTGTTATTGAAATTATCTGGCCACAACCTAAAACAAGCCCGAATGATGAGTATGCCTATAAGATAATTATTTATTACGGTGTTAATGGTCATATTTATTATAACCGTTGCGCGGTGGCATCAGGTGGTGGTTATCTGGTTGGCTGGGAAAACCTGAAGGTTGATGAGGCTTCACTCAGGGCACTGATTGAAGCTCGCGCACCACTGAAAAGTCCGGCACTGACCGGAACTCCGACAGCACCAACGCCGCCGGATGATGCAGCAGGCACTGAGATAGCCAATGCGGCGTTTGTCCGCAAACTGCTTGCCGCGCTGGTTGGCTCATCACCGGAAGCTCTCGACACACTGAACGAGCTGGCAGCGGCGCTGGGGAATGACCCGAACTTTTCAACGACGGTCATTAACGCGCTGGCAGGTAAACAACCGTTAAACGATGTGCTGACAGCAATCAGTGAACTCAGTGAACTGACGCAACGGGCAGATAATCTTCTGTACTTTAATCAGGACGGAAATGCTTCACTGTCTCCGTTGTCAGAAAAAGCCCGCGCATTACTGGCACTGGACACGCCTGAAGCCATGCGCACGGAGATTGAACTGAAAGCAGCCGCAACAATGGAGGCTCAGAGCGATATTTATGACAGAACCGCAGGATGTCTTGCTCTGCCGGGAGCGTTCGGATATGGGCATTTGTTTTCTTCGTCGGAAGTGGTGTATTTCAGCGCCAAAAATGGCCCTGCCGAATTTCTGAAATGGGTGTTCGAAGTCACCCCCGGGCGTTACGCGGTAACACAATATGGAGGGAGTAGCACTTCGTATAATCCCATCATTGCGTATGACATGGGGCAACCTTATTTCCGTGGACTTGTGGATATAGACATACGATACGGAATTAACTCTGGCGGTATTGAAGCAGAAGCGGGTCGGTGGATAACGTTTCATGGTGATACAGAATACAGTGAGGGATTCGGTGAAGGTCCTGCGAAATATCAGGTACTGGTTAAAAAATCCATGCGTCCGTCAGACCTGCCAGAAGCATGGTCGCGGTTGTTCTGGTCACGTAATCGCCTGATGCAACTGTTGTATGCAACAGAAAATACATCAAAGCGTCCTCCGCTCCCCGGAGGCCTGGTTCTTGCTGCATACCTACCGGACGATGGCAGCAGTGAGGTTACGTTACTTCGTGCACAAGGCGTGTCAGGCTCAAGACTCCGGCAGGTGGTCTTTGAAGCGGAGTATCGCACGTCAGGATTTAGTGCTGCTGCGAGGTCATTTGTCTACGAGGGTACCCTGCCTGGTACATATGTCGCTTTATCTGGCGGCCCGGATGTTAAGTTTTATAACCGGGGCTTAGTTTCTTTGTTTGTGAGGATTGCATGA

Tertiary structure

PDB ID
6ff25ce22937ccefaafca49949d4a2ebfbd8e240c680931e828f7bc90b769c01
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5882
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The chromosomal nature of LT-II enterotoxins solved: a lambdoid prophage encodes both LT-II and one of two novel pertussis toxin-like toxin family members in type II enterotoxigenic Escherichia coli (ETEC) Jobling,M.G. 2016-01-10 — GenBank