Protein

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Genbank accession
QCQ64717.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MAFEKFPPTNASEAVAVFKQDVIIVHDVAHGDENAEVLTENGLIPSIAKFIKDTNERIGDGLVNIEHSVTTNRDAVDSHPISAITGLQTALDAKVDTSAFGTAASADLTTSATDTTAGRVTKVGDGGILSSSVPSVVLNIALTSGIYRYGSSDPQSPNAELGETLLSGVIVVLPTTSAAVLQVAYSNSTNAGLRRIYIRYGTTDSWSTWNKQLAVGDYGLGTEFLAAAATRPPSNDANLITVTGFYGTDSVTLGLPALAGGASTLRCGLLALATGSDDFQFIFTSRNTDQVFYGRKVAAGAITWNELIHTGNESTALAKDYAISVAADATLEINKKYYIAGGTTYTLPSGTGLPNGTAISVRRRISVVPTIQTTGGQTIRIGTGDIAYQTDTSITFDINAELIFVWTGSVWEI
Physico‐chemical
properties
protein length:413 AA
molecular weight: 43276,77770 Da
isoelectric point:4,74648
aromaticity:0,07506
hydropathy:0,07506

Domains

Domains [InterPro]
cd19958
138–212
cd19958
QCQ64717.1
1 413
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Rheinheimera phage vB_RspM_Barba31A
[NCBI] 		2565682 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCQ64717.1 [NCBI]
Genbank nucleotide accession
MK719750.1 [NCBI]
CDS location
range 75554 -> 76795
strand +
CDS
ATGGCTTTTGAGAAATTCCCACCCACTAACGCTAGTGAAGCTGTTGCTGTGTTTAAGCAAGATGTAATTATTGTACATGATGTTGCTCATGGTGATGAGAATGCAGAAGTATTGACAGAGAATGGATTAATACCTAGTATTGCCAAATTCATTAAAGATACTAATGAGCGTATTGGTGACGGTCTTGTTAATATAGAGCACTCGGTAACAACAAATCGTGATGCAGTGGATAGTCACCCTATTTCTGCCATTACTGGTTTACAGACCGCATTAGACGCCAAAGTCGATACTTCTGCATTTGGCACAGCAGCATCAGCAGACCTCACTACATCAGCAACAGATACAACCGCTGGTCGTGTTACTAAAGTTGGTGACGGTGGCATCCTATCAAGCTCTGTCCCATCGGTCGTATTAAATATAGCTTTAACAAGTGGCATTTATCGCTATGGTTCATCTGACCCCCAATCACCGAACGCAGAATTAGGCGAGACACTTTTAAGTGGTGTTATTGTTGTTCTACCAACGACTAGCGCCGCTGTACTGCAAGTGGCCTATTCAAATTCAACCAATGCCGGTCTTAGACGCATCTATATCCGATATGGGACAACCGATAGCTGGTCTACGTGGAATAAGCAGTTGGCAGTCGGAGACTACGGATTAGGCACAGAGTTCTTAGCTGCCGCAGCAACGCGCCCACCAAGCAATGACGCCAACTTAATAACCGTAACGGGTTTTTATGGAACTGACTCAGTAACACTTGGTTTACCAGCGTTAGCTGGTGGGGCAAGTACGTTACGGTGCGGATTGTTAGCATTAGCAACAGGCAGCGACGACTTTCAGTTTATATTTACTTCCAGAAATACGGATCAGGTTTTTTATGGGAGAAAGGTTGCAGCAGGCGCGATAACTTGGAATGAGCTAATCCACACAGGGAACGAATCAACAGCATTAGCAAAGGATTACGCTATCTCAGTAGCAGCCGATGCTACGCTGGAGATAAACAAAAAATATTATATCGCAGGTGGTACGACTTATACGCTGCCAAGTGGAACGGGACTGCCTAACGGTACAGCGATTTCTGTTAGACGTAGAATTTCGGTTGTGCCGACTATACAAACTACAGGTGGTCAGACAATCCGCATAGGTACTGGCGACATCGCCTACCAGACGGACACATCAATCACATTTGACATTAACGCAGAGTTGATATTCGTTTGGACTGGCTCAGTATGGGAGATTTAA

Tertiary structure

PDB ID
b35439f17eaf2fa4f6e96fa2c95e1110a417e80bab74074ec73d0b81e83e51d4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7981
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and seasonal variations among aquatic phages infecting the Baltic Sea Gammaproteobacteria Rheinheimera sp. bal341 Nilsson,E., Li,K., Fridlund,J., Sulcius,S., Bunse,C., Karlsson,C.M.G., Lindh,M., Lundin,D., Pinhassi,J. and Holmfeldt,K. 2019-09-15 — GenBank