Protein

View in Explore
Genbank accession
WGG14615.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,92
TF
Evidence Phold
Probability 1,00
Protein sequence
MVTKTVIPADITKLKNESLNKNNNLSDLADRAAAWLNVRPIGSTPLAGDPVNDYDAVTKRWVENKINTGTVGPTMNGVMNYGVGDFHLRDSRAYIQPYEVVSDGQLLNRADWPELWAYAQMVGPISDDVWVSDVRQRGKYSTGDGTTTFRVPDRNGVQLNSIKGLFAHGDGGGDAGQAGSISEAAAPNITGSFPGAIAGAYESAINRYSSRFGLNGAIGAENGLGVGRDGLNKSGTILTPDNTYGFSFDASVADPVYGRYGIKGTIIPNSFIGVWVIRASGGFVAANTSWSVINSDSTRPNASTRASSGKVLAQYKIGESLEAQAEFRSDAYIDGMYYAIMSIYNSTKGVTKELAFDDSGTLNSDRYSARYGTMMAWSQTGLVKGTFSTEEQAIGTNYAFNSILSGSQYSTAGYKTSAHFGLIHNDLGSFADSCWHVSGDADNKYGVRLKIQPNNNSIYFYSWWPNGAATYTLQLNAISDSRLKHDIKPIDAAKSIEVLKGLEFQSFIYNNDEESRIRRGVIAQQVETIEPLYVKTRRFYNDDGVEQEQKELDTTPMLLDTMHVVQDLIKRVEDLEEELKQLRANLVQ
Physico‐chemical
properties
protein length:588 AA
molecular weight: 64252,62430 Da
isoelectric point:5,24262
aromaticity:0,09864
hydropathy:-0,38401

Domains

Domains [InterPro]
Coil
11–31
Coil IPR030392 Coil
IPR030392
479–579
IPR030392
WGG14615.1
1 588
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage phC17
[NCBI] 		3038310 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WGG14615.1 [NCBI]
Genbank nucleotide accession
OQ680481.1 [NCBI]
CDS location
range 1868 -> 3634
strand +
CDS
ATGGTAACTAAAACAGTAATTCCTGCGGATATTACAAAACTTAAAAATGAGTCACTTAACAAGAATAATAACTTAAGTGACCTAGCAGATCGCGCAGCTGCGTGGCTAAATGTTCGTCCTATTGGATCTACTCCCCTTGCGGGAGACCCTGTTAATGATTATGATGCTGTAACTAAGCGTTGGGTAGAAAATAAGATTAATACTGGTACAGTTGGACCCACCATGAATGGTGTTATGAACTACGGTGTTGGTGATTTTCACCTCCGAGATAGTCGTGCGTATATTCAGCCATACGAAGTCGTTTCTGACGGACAGCTCCTTAATAGGGCTGATTGGCCTGAACTTTGGGCGTATGCACAAATGGTAGGTCCAATTAGTGATGACGTTTGGGTGTCCGATGTAAGACAACGTGGGAAATATTCTACGGGAGATGGTACCACTACTTTCCGCGTCCCAGATCGTAATGGTGTGCAACTAAACTCAATCAAAGGGTTATTCGCTCATGGTGACGGTGGGGGGGATGCTGGTCAAGCTGGTTCAATATCAGAAGCTGCAGCACCCAATATTACCGGTAGTTTTCCTGGTGCTATTGCTGGTGCGTATGAATCCGCAATTAATAGATACTCATCAAGATTTGGTCTTAATGGTGCGATCGGTGCTGAAAATGGATTAGGTGTTGGTAGGGATGGGTTAAATAAATCTGGCACTATACTTACACCGGATAATACATACGGATTTAGTTTTGATGCAAGCGTAGCTGACCCTGTTTATGGGCGTTATGGAATAAAAGGTACTATTATTCCAAACAGCTTTATAGGTGTATGGGTAATCCGCGCTTCTGGCGGGTTTGTTGCTGCAAACACATCCTGGTCTGTTATTAATTCGGACAGTACCAGACCAAATGCTTCCACTCGCGCTAGTTCCGGTAAAGTTTTAGCACAATACAAAATAGGCGAAAGTCTTGAAGCCCAAGCAGAGTTTCGATCAGACGCTTATATTGATGGCATGTATTATGCAATCATGTCTATATATAATAGTACAAAAGGGGTGACAAAAGAACTAGCCTTTGACGATTCAGGTACATTAAACTCTGATAGATATAGCGCCCGCTATGGGACTATGATGGCTTGGAGTCAAACAGGTCTTGTTAAAGGTACATTTAGTACAGAAGAACAGGCTATTGGAACAAATTACGCTTTTAACAGTATTTTGAGTGGTTCCCAGTATTCTACTGCGGGGTATAAAACATCTGCACATTTTGGATTAATCCATAATGACTTGGGTTCCTTTGCTGATTCTTGCTGGCACGTATCGGGAGACGCGGATAACAAATATGGTGTACGTTTAAAAATTCAACCGAACAATAATAGTATTTATTTCTATTCTTGGTGGCCCAATGGCGCAGCAACGTATACTCTGCAGTTAAATGCTATATCTGATTCTCGTTTAAAGCACGATATTAAACCTATAGATGCAGCTAAGTCCATCGAGGTATTAAAAGGACTGGAATTCCAGTCCTTTATATACAACAATGATGAAGAATCCCGTATCCGACGTGGGGTTATTGCTCAGCAAGTAGAGACTATAGAGCCACTCTATGTAAAGACTAGAAGATTCTATAATGATGACGGAGTAGAACAGGAGCAAAAGGAATTAGATACAACTCCAATGCTTCTTGATACTATGCATGTTGTGCAAGATCTTATTAAAAGGGTTGAAGACTTAGAGGAAGAACTCAAGCAATTAAGAGCAAACCTAGTGCAGTAA

Tertiary structure

PDB ID
7d1e20602c678438e03454b0ea5e5800e582d999374bf201438613e900fc2f3a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6877
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Comparative analysis of effectiveness for phage cocktail development against multiple Salmonella serovars and its biofilm control activity Ribeiro,J.M., Pereira,G.N., Durli,I., Teixeira,G.M., Bertozzi,M.M., Verri,W.A., Kobayashi,R.K.T. and Nakazato,G. — — GenBank