Protein

View in Explore
Genbank accession
ASZ71004.1 [GenBank]
Protein name
neck passage structure
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSLDNFKNRAIVWDTVNKGFPQPIQIMQGDVNARTLLIKIVDNGVEIDLTGHSLKLSYQYTNSINSGFVMIPPKDLAKGEFILVIPTEMTTTGVIEANLILLNESLEQVIVSKNLTFISDNSTVTDLAQEVNNKIDDFTKLLLENMPQVMRSELNDLHAQTESNKSNIELKANLADMTSLQSAMTDLKKEVEAFGISPENLVTIKSLLDAIASKASESEVVELKNSVKVLTSNISLMSNGDYSPKANQTDLDNLQEKAKNEFKERGVNVKWFGAKGDGVTDDTQAIQNAINKYDNVYIPDGTYLISTLSIDKKTFVHGAGQSITILKSKDESDKQMINLTLSAPRSMISDLTLQGGDSWDNVYSSKLGLVLSSEGRLVEQDTMIAITNVTINFFFDNFTLQEGHRGVACDQLYCGGAAHRNIVVLGTDNSLINCISAMSMDDGIYVYGSNNRLTSCKSFMAGMSKTAGAGARIQGSFISMANCEFQENYLCNLYLYNCNSSNIIGIILDGAGAHNDTGSLYYKDTEFSNVSIPICNLRIHNCSADNISATITNGRTVNKNSWTAAIGCYTLYPKLDTKNNINLTSINLDSKSADTYKTVDLPAYYWLNNSLTINGANTINDVNYELSHGFNVYSYNTPSSGLTITNNQDLNGNLAVSNTEYNLIINYPKNSKQLSISFDYDYDKNLGDNLFGVFDVMIACKNSDGTTKYYTSKFNYLSDLMFTISISDILPKTDYGEIMYVAGRFRFKNTSASTTNVAVKNLKTLIVTGL
Physico‐chemical
properties
protein length:770 AA
molecular weight: 84776,59070 Da
isoelectric point:4,93041
aromaticity:0,08182
hydropathy:-0,20156

Domains

Domains [InterPro]
IPR018913
8–147
IPR018913 IPR011050
G3DSA:2.60.40.3350
13–125
G3DSA:2.60.40.3350 IPR012334
IPR024535
267–456
IPR024535
ASZ71004.1
1 770
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage 96603
[NCBI] 		2029676 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ASZ71004.1 [NCBI]
Genbank nucleotide accession
MF448572 [NCBI]
CDS location
range 7108 -> 9420
strand +
CDS
ATGAGTTTAGATAATTTTAAAAATAGAGCGATTGTATGGGATACGGTCAATAAAGGCTTCCCTCAACCAATACAAATAATGCAAGGCGACGTCAATGCAAGAACGTTATTGATTAAAATAGTTGATAATGGAGTTGAAATTGATTTAACTGGTCATTCATTAAAACTTTCATATCAATATACTAATAGCATTAATTCTGGTTTTGTTATGATTCCTCCTAAGGACTTAGCTAAGGGAGAATTTATTTTGGTGATTCCTACTGAAATGACAACAACTGGAGTTATCGAGGCAAATTTAATTCTTCTCAACGAAAGTTTAGAGCAAGTTATTGTCAGTAAGAATCTTACATTTATATCAGATAATTCTACAGTTACAGATTTAGCTCAAGAAGTAAATAATAAGATTGATGATTTTACAAAATTATTATTGGAAAATATGCCACAAGTAATGCGTAGTGAGTTGAATGACTTACATGCTCAAACTGAATCAAACAAGAGCAATATTGAGCTTAAAGCAAATTTAGCTGATATGACGAGCTTACAAAGTGCAATGACAGACCTTAAAAAAGAAGTAGAAGCATTTGGTATTAGTCCTGAAAATTTAGTTACTATAAAATCGCTATTAGACGCAATCGCAAGTAAAGCCAGTGAATCGGAAGTTGTTGAACTAAAAAATTCAGTAAAGGTTTTAACAAGTAATATTTCTCTGATGAGTAACGGAGATTACTCTCCTAAAGCCAATCAAACGGATTTAGACAACTTACAAGAAAAGGCAAAAAATGAGTTTAAAGAACGAGGAGTTAATGTCAAATGGTTTGGAGCTAAAGGAGACGGAGTAACTGATGATACTCAAGCAATACAAAATGCGATTAACAAATATGACAACGTCTATATTCCAGACGGAACATATTTAATCAGCACACTGTCAATTGACAAAAAGACATTTGTGCATGGAGCAGGGCAGAGCATTACAATTTTGAAATCAAAGGACGAATCAGACAAACAGATGATTAATCTTACACTGTCTGCACCTAGGTCTATGATCAGTGACTTAACTCTGCAAGGCGGCGACTCATGGGATAATGTGTACAGCAGCAAACTGGGACTGGTATTGAGTTCGGAAGGTAGGCTAGTAGAACAAGACACAATGATTGCTATCACAAATGTAACCATTAATTTCTTCTTTGATAATTTCACTCTGCAGGAAGGCCACCGTGGTGTTGCGTGTGATCAGCTATATTGTGGTGGTGCTGCGCACAGAAACATTGTTGTGCTCGGTACTGACAACTCGTTAATTAATTGTATATCTGCAATGAGCATGGATGACGGCATTTATGTATATGGTAGCAACAATCGATTAACTTCTTGTAAATCATTCATGGCTGGTATGAGCAAGACTGCTGGTGCTGGAGCTAGAATTCAAGGTTCGTTTATAAGCATGGCCAACTGTGAATTTCAAGAGAATTATCTATGCAATCTATACTTGTATAATTGCAACAGCAGCAACATTATTGGTATCATACTCGACGGTGCAGGAGCGCACAACGACACCGGAAGCCTTTATTACAAAGACACCGAATTCAGTAACGTTTCAATCCCAATTTGTAATTTGAGAATACATAACTGTAGTGCAGATAACATTTCAGCAACGATAACCAACGGAAGGACGGTCAATAAAAACTCGTGGACAGCAGCGATTGGGTGCTATACACTTTATCCAAAACTTGATACAAAGAATAATATTAATCTGACGTCAATTAATCTTGATTCAAAATCAGCTGACACATATAAAACAGTTGATCTACCGGCATATTATTGGTTAAACAACAGCTTGACTATTAATGGTGCCAATACTATCAATGATGTCAACTATGAACTTTCACACGGATTTAATGTCTATTCGTATAATACTCCAAGTTCTGGTTTAACCATTACAAATAACCAAGATCTAAATGGAAATCTGGCTGTCAGCAACACAGAGTATAACTTGATAATAAATTATCCGAAAAATAGTAAACAATTGTCTATAAGTTTTGATTATGATTATGACAAAAATCTCGGCGACAATCTTTTTGGTGTTTTTGACGTCATGATTGCTTGTAAAAACTCAGATGGCACTACTAAATACTATACAAGCAAGTTTAACTATTTATCCGATTTGATGTTTACAATATCTATCAGTGATATTCTGCCAAAGACTGATTATGGCGAAATAATGTACGTAGCGGGCCGGTTTCGATTCAAAAATACGAGTGCATCGACCACTAACGTTGCAGTTAAAAATCTAAAAACGTTAATTGTGACGGGGTTATAA

Tertiary structure

PDB ID
c0b4daff18e047383839c711c9da4ae33bad1588922887109263cfaa9e766c1c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6076
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Comparative genome analysis of lactococcal phages belonging to the virulent 936 group Oliveira,J. 2024 — GenBank