Protein

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Genbank accession
CAB4157172.1 [GenBank]
Protein name
Phage tail collar domain containing protein
RBP type
TF
Evidence RBPdetect
Probability 0,84
TF
Evidence Phold
Probability 1,00
Protein sequence
MALGVRGSNPIWTEFDLQGHLFDDTFYLFVLENNIPYMPAEVYHDPDLNLPWTNPIQFLGNGTLPTDIYFETDVVYRLEFRQGPTQADPLIYEINNYVAGTGGSTPVDTVAFASSNQITNPQFALISFSSPLTISATDPDPIEIGPGWFLELAGTGTATITQVPLTSTNTNPSNAPYALQLTLTGWDTDGVFLRQRFQQNGMLWADKIVSSTLTARVQGVAISVTASLIDSNGTTLAQVLNVPSINGSFNEFTGYGELPATSNPDTPPAAYIDYKLALPSNVDIYLSSIQLVVQELPIEPSFEQDSIDRQIDHTYHTAYPIVPVGTIIDFHGFTIPSHYLLTDGTAYSRTAYNQLFQALTKVETVTLTSTVNTFTVVSSTDYWIGMAVEGTGIPASTTISGIAGTTITISNAATITGSSAVRFFSAGAGNGSTTFNVPNLIDYVVAQSAGSLFTSGTNGVGAKGGAATHTLTIAEMPGHTHPGSTTPMGAGAAVNGAGGNSSLSLLGVATAVSIATQGDGNPHSIVQQTVLMKKLIRYE
Physico‐chemical
properties
protein length:539 AA
molecular weight: 57125,08750 Da
isoelectric point:4,41908
aromaticity:0,09276
hydropathy:0,05826

Domains

Domains [InterPro]
IPR037053
321–372
IPR037053
SSF88874
321–497
SSF88874
CAB4157172.1
1 539
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4157172.1 [NCBI]
Genbank nucleotide accession
LR796656 [NCBI]
CDS location
range 3948 -> 5567
strand -
CDS
ATGGCACTAGGTGTGAGAGGAAGCAACCCAATTTGGACGGAATTTGATCTCCAAGGCCATTTATTTGATGACACGTTTTATTTATTCGTGCTTGAAAATAATATTCCTTATATGCCAGCCGAGGTTTATCACGATCCTGACTTAAATCTTCCATGGACCAACCCTATCCAATTTTTAGGAAACGGTACATTACCAACAGATATTTATTTTGAAACTGATGTGGTTTATAGGCTTGAGTTTAGGCAGGGTCCAACGCAGGCAGATCCCCTAATTTATGAAATTAATAATTACGTTGCAGGCACGGGCGGATCAACCCCTGTTGATACAGTAGCTTTTGCCTCTAGTAACCAGATAACCAACCCGCAATTTGCGCTTATTAGTTTTTCCTCCCCCTTAACTATAAGCGCAACAGATCCCGATCCAATTGAGATTGGGCCGGGTTGGTTCCTTGAGCTTGCAGGTACAGGAACGGCAACTATTACCCAAGTACCGCTTACCAGCACCAACACAAACCCATCAAATGCTCCCTACGCTCTTCAATTAACCTTAACAGGATGGGATACGGACGGGGTATTTTTGCGTCAAAGATTCCAACAAAATGGCATGTTATGGGCTGATAAAATTGTCTCCTCTACTCTTACCGCTCGCGTGCAAGGCGTTGCCATAAGTGTTACTGCCAGTCTTATTGACTCAAACGGTACGACACTTGCTCAAGTATTAAATGTTCCTAGTATTAACGGATCATTCAATGAATTCACAGGCTATGGCGAGTTACCAGCAACCTCAAATCCGGATACACCTCCTGCGGCTTACATTGATTATAAATTAGCGCTACCTAGTAATGTTGATATTTATTTATCAAGTATCCAGTTAGTGGTGCAAGAGCTGCCCATAGAGCCTAGTTTTGAGCAAGACTCAATAGATAGACAAATTGATCACACCTATCATACAGCCTATCCAATTGTACCGGTCGGCACTATTATTGATTTTCATGGATTTACAATACCGTCCCATTATTTATTAACCGATGGTACAGCTTATAGCCGGACCGCATATAATCAGCTTTTCCAGGCATTAACAAAGGTGGAGACGGTTACACTGACAAGTACGGTTAATACTTTTACGGTTGTTTCAAGTACTGATTATTGGATTGGTATGGCTGTCGAGGGCACTGGGATTCCTGCATCAACTACGATATCCGGTATAGCAGGGACTACGATTACTATCTCCAATGCGGCAACTATAACCGGATCGTCCGCTGTTAGGTTTTTTTCAGCTGGTGCGGGAAATGGATCTACCACCTTCAACGTTCCCAATTTAATTGATTACGTAGTGGCCCAAAGCGCAGGCTCTTTATTTACATCTGGTACTAACGGGGTGGGGGCTAAAGGCGGTGCGGCCACACATACCCTTACTATAGCGGAAATGCCAGGCCATACCCACCCTGGAAGCACCACTCCTATGGGCGCAGGTGCTGCTGTTAATGGAGCAGGCGGTAATTCCTCTTTATCCTTATTAGGTGTAGCAACTGCTGTTTCAATAGCTACACAAGGGGATGGAAATCCACACAGTATTGTCCAGCAAACAGTGCTTATGAAAAAATTAATTAGATATGAATAA

Tertiary structure

PDB ID
babe8f85d84ab875be85d7c7325f20a8778e8e84099d9151b907cd2c050d426e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7840
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50