Protein

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Genbank accession
CAB4220951.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,84
TF
Evidence Phold
Probability 1,00
Protein sequence
MPIYTDRIVTSNTQPTQSTTTGALVVAGGAAIDGSLIARRIYTIDGVYWFNNSAAFVGRTINNNVQIGATGPHGPQGATGYAGDVGLPGATGESGRQGSTGPIGPVGATGVQGATGLTGATGPTRTGALGPRGATGLPGFASKQGATGTGGPQGEMGATGPTGETGPLGPTGDPGGATGATGDTGFWTYSELTKKHTNIGGEYVFTYDTTFTNYYINGLSGDLTPKFMSLPPLDSALGTGFGQSIVFVLTVQQNSSPHTITPNIKIGTTSHQVRWLNSTVPVGDANRLDVFTFCCLQLGGAPNPEIWVVTGQCATYGIEV
Physico‐chemical
properties
protein length:320 AA
molecular weight: 32337,48990 Da
isoelectric point:5,48294
aromaticity:0,07812
hydropathy:-0,12063

Domains

Domains [InterPro]
IPR008160
68–123
IPR008160
IPR050149
70–185
IPR050149
CAB4220951.1
1 320
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4220951.1 [NCBI]
Genbank nucleotide accession
LR797503 [NCBI]
CDS location
range 60564 -> 61526
strand +
CDS
ATGCCTATATATACGGATCGAATTGTAACTAGTAATACACAACCAACACAAAGTACTACCACCGGCGCATTAGTAGTTGCAGGTGGCGCTGCTATTGACGGTAGCTTAATAGCCAGAAGAATCTATACCATAGATGGAGTATACTGGTTTAACAATTCTGCTGCATTTGTTGGCAGAACTATTAATAATAATGTACAAATAGGTGCAACTGGACCACACGGTCCGCAAGGAGCCACAGGTTATGCTGGCGACGTCGGATTGCCCGGGGCAACCGGAGAAAGTGGCAGGCAGGGATCAACTGGCCCAATTGGCCCAGTAGGTGCTACTGGAGTGCAAGGAGCCACTGGACTAACAGGCGCAACCGGACCTACTAGGACTGGCGCTCTTGGCCCAAGAGGAGCCACAGGATTACCAGGATTTGCTTCTAAGCAGGGCGCAACCGGAACTGGTGGACCGCAAGGTGAAATGGGAGCCACTGGGCCAACTGGCGAAACCGGTCCGCTTGGCCCCACCGGCGATCCAGGTGGAGCAACTGGGGCCACCGGTGATACAGGATTTTGGACTTATTCAGAACTAACAAAAAAACATACAAATATCGGTGGCGAATATGTGTTTACATATGATACCACTTTTACCAACTATTACATAAACGGGTTATCGGGAGACCTAACTCCAAAATTTATGTCGTTGCCACCATTGGATTCAGCACTAGGAACTGGATTTGGTCAGAGTATTGTATTTGTTTTAACAGTTCAACAAAATTCAAGTCCGCATACTATTACTCCTAATATAAAAATAGGTACAACATCACATCAGGTTAGATGGTTAAATAGCACAGTGCCAGTTGGTGATGCTAATAGATTGGATGTATTTACTTTTTGTTGTTTGCAACTTGGTGGCGCACCCAACCCTGAAATTTGGGTAGTAACGGGTCAATGCGCCACATATGGAATTGAAGTATAA

Tertiary structure

PDB ID
e3d977962eeb13a4cd1a7e34790608207ad6d5efbc309294c95cbbaf53824c7b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6338
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50