Protein

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Genbank accession
ASD52170.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MSKLQTVVKNLEIKMLNQMHELMDNRLFSFEDAIKRVFWPLSIEKSIQTLAASNPQKYTVEKAKDIMLQTFSNRVYHGVDVIHGSNTIPVHKYFEPLIPANSWKKLPTFSEINIHYDYLSGIADVQLIFTKPNSIPIVEEFLTLLDQVSFFKSKRIENGIKLTIQKPIAIQSLRKLPSKKVKKNDPGIVIEHALQGLRKDSYISDMKILNSERNKLIDAEIAKLQQKRLVLAAQDQQLIDTINTLNRSKVVI
Physico‐chemical
properties
protein length:252 AA
molecular weight: 28965,52810 Da
isoelectric point:9,57209
aromaticity:0,07143
hydropathy:-0,22500

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PspYZU05
[NCBI] 		1983556 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ASD52170.1 [NCBI]
Genbank nucleotide accession
KY971610 [NCBI]
CDS location
range 162019 -> 162777
strand -
CDS
ATGTCTAAACTGCAAACAGTGGTTAAGAACTTAGAAATTAAAATGCTTAACCAAATGCATGAGCTAATGGATAATAGATTATTTTCATTTGAAGATGCTATTAAAAGAGTATTTTGGCCTCTTTCAATAGAAAAGAGTATTCAGACCCTAGCTGCTTCAAATCCACAAAAATATACCGTTGAGAAAGCTAAAGATATAATGCTTCAGACATTTAGCAATCGTGTGTATCATGGTGTTGATGTTATTCATGGTTCAAATACAATCCCGGTGCATAAGTATTTTGAACCATTAATCCCAGCGAATTCTTGGAAAAAATTGCCAACGTTTTCAGAAATCAATATTCATTACGATTATCTGTCTGGGATTGCGGATGTTCAATTAATTTTCACTAAGCCAAACAGTATACCTATTGTTGAAGAGTTCTTAACATTACTTGACCAGGTTTCGTTCTTTAAAAGTAAGAGAATTGAAAATGGCATTAAGCTTACCATCCAAAAGCCTATAGCCATTCAATCTCTTCGTAAACTTCCATCTAAGAAAGTGAAGAAGAATGATCCTGGTATAGTGATTGAACACGCTCTTCAAGGCCTACGTAAAGATTCATATATCTCTGACATGAAAATATTGAACTCTGAACGTAATAAACTTATTGATGCTGAAATTGCAAAGCTCCAGCAAAAACGTCTTGTATTAGCTGCTCAAGACCAACAGTTAATAGACACAATTAATACGTTGAATAGATCAAAGGTGGTAATTTGA

Tertiary structure

PDB ID
2dfba6b534ae8d6b81df6bbcacee88a045a870801535f9eb86db5b2d8a1b6512
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5358
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of lytic bacteriophages infecting Pseudomonas strains for biocontrol of fish and shrimp spoilage during chilled storage Yang,Z., Tao,X., Gao,L. and Rao,S. 2022 — GenBank