Protein

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Genbank accession
CAB4199071.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,78
Protein sequence
MFGIPENKFNCRQQKQITEKKIFNPEIMKKLLFILILSLFYSCVTFGQSTIEHPAAWWSSNNPIVAPSTFAKESDSLFIKFGDGKTHYNSLKYINSIPGAFMSKYKSDMTAPIIEQRGAIGATGATGATGATGATGATGATGATGATGATGTTGNNGATGPTGTNGTNGVTGATGTTGGTGTNGSNGATGPTGGIVYLSHRSGGTFYYSPNYGSTTTTAFTVATLYAMPFYVPASTTYTKLTVVVTVGGVLSKVRTGIYNDGGGYPTTLVYDAGTVASTSGGNAINTLGTPQTLSAGWYWLASVTQAVVCTIQSANGNNVNQFANVPTTDPYSSGPQHGYSQTGITGALPSPWGSTLTPTQVLPIVWITPQ
Physico‐chemical
properties
protein length:371 AA
molecular weight: 38136,11550 Da
isoelectric point:9,08490
aromaticity:0,09973
hydropathy:-0,08706

Domains

Domains [InterPro]
SSF69349
55–213
SSF69349
IPR008160
118–169
IPR008160
PTHR24637
118–193
PTHR24637
CAB4199071.1
1 371
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4199071.1 [NCBI]
Genbank nucleotide accession
LR797284 [NCBI]
CDS location
range 14904 -> 16019
strand +
CDS
GTGTTTGGAATACCTGAAAACAAATTTAATTGCAGACAGCAAAAGCAAATTACCGAAAAGAAAATTTTTAATCCTGAAATAATGAAAAAATTATTATTTATTTTAATCTTATCTTTATTTTATAGTTGCGTTACATTTGGGCAATCAACTATTGAGCATCCCGCAGCTTGGTGGAGTTCAAACAATCCGATAGTAGCACCTTCGACATTTGCAAAGGAAAGCGATTCATTATTTATTAAATTTGGTGACGGTAAAACACATTATAATTCACTAAAATATATTAATTCTATTCCTGGGGCTTTCATGTCAAAATATAAAAGTGATATGACTGCCCCAATTATTGAACAAAGGGGAGCCATTGGTGCAACAGGTGCAACAGGTGCAACAGGGGCAACAGGAGCAACAGGAGCTACTGGTGCCACAGGGGCAACAGGAGCAACAGGAGCTACTGGTACAACAGGAAACAACGGAGCGACTGGTCCCACAGGTACGAATGGAACAAACGGAGTTACAGGTGCTACAGGTACTACCGGAGGAACTGGAACAAATGGCAGTAATGGAGCAACAGGACCCACAGGCGGAATAGTTTATTTATCACACAGAAGCGGAGGAACATTCTATTATTCGCCTAACTATGGTTCAACAACCACAACAGCGTTTACCGTTGCCACCCTTTACGCGATGCCATTCTATGTTCCTGCTTCAACTACATATACTAAACTAACTGTAGTAGTAACTGTGGGTGGTGTATTATCAAAAGTCAGGACAGGAATATACAATGACGGTGGAGGTTATCCCACAACCTTAGTTTATGATGCAGGAACTGTGGCAAGTACATCAGGGGGGAATGCAATAAATACGCTTGGAACGCCACAAACGTTGAGCGCAGGGTGGTATTGGTTGGCTTCAGTAACTCAGGCGGTTGTATGTACTATTCAGTCAGCAAATGGAAATAACGTAAATCAATTTGCTAACGTTCCGACAACTGACCCTTATTCGAGTGGTCCGCAACATGGTTATTCTCAAACAGGAATTACAGGGGCTTTGCCAAGTCCATGGGGAAGTACATTAACACCAACACAAGTTTTACCAATAGTATGGATTACACCACAATAA

Tertiary structure

PDB ID
118ad57f2d3ba03592b9950661e2548e1a86ce3a798e5597caa38bbc438ba7ca
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6028
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50