Protein

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UniProt accession
R9R1W8 [UniProt]
Protein name
BppU N-terminal domain-containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSLDNFRNRAIVWDTVNKDFPQPIQIMQGDVNARTLSVKIIDNGGEIDLTGHSLKLTYQYTNSSNSGFVMIPPENLTKGEFLLVIPTEMTKAGVIEANLILLNEDKEQVIVSKNLTFISDNSTVTDLAQEVNNKIDDFTKLLLENMPQVMRSELNDLHAQTESNTSNIELKANQTDLNNLQTIVNNQGITISTAAQETEVRSLISLLDNVKQTKRVARINLLLEQYKTSGYYRQYTNGEKLVNTDYDLFDMVPVNADTDYFTGISPNAHIAFYDFEQKYISGLVKPQPNFTIPSSYLNTLVVKVPTNAKYMSYACNKNATQSVFYENYNPILDTSQSIFEGLLPFEQIANLPRGLKKVCNQNMFNKKLVVSGRYLDSANGGLPHNANYNVYFMKVKPNTNYTTSGFVNNHDAFYDISGKFISSGNKSGTITTPANAFFWGISLTNTELPGAVICEGNVAKYSDFGTGAIFEVVDTAPQTLNVGADKKFTTIQAAVNFAKDGDTILISSGTYHEAVDAKTKLLHFKGVDKNTVTLEYENGAYSLPPLEISKGSVENMTIHAISQAQVSGEPAKAYCFHADYDIQIGHTLSFTNVKFINDDYQVIGVGLRNNFTLEFNSCDFVTPSGNNAFYVHTDPIRDNSSNQNLIVKDCSIVNNGTGATIHMQSQERVGAVAKVTWQRNIVVNLSGGKLIDMATYNNGLAKDKWLGSSDFVLQPTSAMNNIAQLNFN
Physico‐chemical
properties
protein length:728 AA
molecular weight: 80580,61400 Da
isoelectric point:5,29969
aromaticity:0,09341
hydropathy:-0,27239

Domains

Domains [InterPro]
IPR018913
10–147
IPR018913 IPR011050
G3DSA:2.60.40.3350
11–125
G3DSA:2.60.40.3350 IPR012334
R9R1W8
1 728
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage jm2
[NCBI] 		1262535 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus lactis subsp. cremoris
[NCBI] 		1359 Bacteria > Firmicutes > Bacilli > Lactobacillales > Streptococcaceae > Lactococcus

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID
4735205540b9001d72f646fe9cc981050cf8f5bc70615d8b008a00854a464d49
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6998
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Investigation of the relationship between lactococcal host cell wall polysaccharide genotype and 936 phage receptor binding protein phylogeny. Mahony J, Kot W, Murphy J, Ainsworth S, Neve H, Hansen LH, Heller KJ, Sørensen SJ, Hammer K, Cambillau C, Vogensen FK, van Sinderen D 2013-07 23666332 PubMed
Investigation of the Relationship between Lactococcal Host Cell Wall Polysaccharide Genotype and 936 Phage Receptor Binding Protein Phylogeny Jennifer Mahony, Witold Kot, James Murphy, Stuart Ainsworth, Horst Neve, Lars H. Hansen, Knut J. Heller, S�ren J. S�rensen, Karin Hammer, Christian Cambillau, Finn K. Vogensen, Douwe van Sinderen 2013-07-15 10.1128/AEM.00653-13 DOI