Protein

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Genbank accession
ABA46529.1 [GenBank]
Protein name
collagen triple helix repeat protein
RBP type
TF
Evidence RBPdetect2
Probability 0,90
TF
Evidence Phold
Probability 1,00
Protein sequence
MDCFKKGKFIPFPCALPIPEAGPTGPTGPPGSAGGSTGPTGPTGPQGLQGIQGVQGNPGTTGPQGIQGIQGIPGVSGPIGPIGPTGIQGVQGIQGFPGIPGPMGPIGLTGPTGIQGIQGIQGVQGIQGIQGDVGPTGPQGIPGIPGLTGPTGSQGVTGVTGPSGGPPGPTGATGPTGPAGGPPGPTGPTGPAGGPTGLTGPTGPTGPTGIQGIQGVQGTQGIPGPTGPQGIQGVQGLQGIPGIPGSMGPTGLTGPTGLQGIQGIQGNPGPTGPFGPTGPTGLQGIQGLQGIQGIPGPTGPQGIQGPTGPASTLSTKAILFGGTNSGFQRIAGSPGADSQDIPYVLGGAGSVVGLSASISINNLPIGVYTIRVCKNVPINLAAPGPGQVISTIILTTTAVISGTIILTINPSDIGAQPVRVFNPNLVIAPATVAWSSTIPGDIVARGDAMSLFITPGITQNAVYTVFLHTGN
Physico‐chemical
properties
protein length:471 AA
molecular weight: 44647,08150 Da
isoelectric point:7,70512
aromaticity:0,02972
hydropathy:0,06051

Domains

Domains [InterPro]
IPR050149
131–335
IPR050149
ABA46529.1
1 471
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Wbetavirus gamma53
[NCBI] 		3433351 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ABA46529.1 [NCBI]
Genbank nucleotide accession
DQ222855 [NCBI]
CDS location
range 30723 -> 32138
strand +
CDS
ATGGATTGTTTTAAAAAAGGTAAATTTATACCATTTCCATGTGCTTTACCAATTCCTGAAGCTGGTCCTACTGGCCCAACTGGTCCACCTGGATCAGCTGGAGGCTCGACCGGTCCAACTGGTCCAACCGGCCCGCAGGGTTTACAAGGGATTCAAGGGGTTCAAGGGAATCCAGGAACTACTGGACCTCAAGGAATTCAAGGAATTCAAGGAATTCCAGGGGTTTCAGGTCCTATTGGTCCTATTGGTCCTACTGGAATCCAAGGAGTTCAAGGCATTCAAGGATTTCCTGGCATTCCAGGTCCTATGGGCCCGATAGGACTAACCGGTCCGACTGGTATCCAAGGTATTCAAGGGATTCAGGGAGTTCAAGGTATCCAAGGTATTCAAGGGGATGTAGGCCCAACTGGCCCTCAGGGAATTCCGGGTATTCCAGGATTAACTGGCCCAACTGGCTCTCAAGGTGTTACTGGAGTTACTGGCCCATCCGGAGGCCCACCAGGTCCAACTGGTGCAACAGGTCCAACCGGTCCAGCTGGAGGCCCACCAGGTCCAACAGGTCCAACCGGTCCAGCTGGAGGTCCAACAGGATTAACTGGCCCGACTGGCCCGACTGGTCCAACAGGAATTCAAGGTATTCAAGGGGTACAGGGTACTCAAGGTATTCCGGGTCCAACTGGTCCACAAGGGATCCAAGGAGTTCAAGGACTTCAAGGAATACCAGGCATTCCAGGTTCTATGGGCCCAACAGGACTAACTGGTCCGACTGGGCTTCAAGGTATTCAAGGGATTCAGGGGAATCCAGGTCCGACTGGTCCCTTTGGCCCGACTGGCCCGACCGGGCTTCAAGGTATTCAAGGCTTACAGGGTATTCAAGGTATTCCAGGTCCAACAGGACCTCAAGGAATCCAAGGTCCAACAGGACCTGCTAGCACACTTTCCACAAAAGCTATTCTTTTTGGGGGTACTAATTCAGGGTTTCAACGTATAGCTGGATCACCGGGTGCAGATTCACAAGACATTCCTTATGTACTTGGCGGAGCTGGTAGTGTTGTAGGTCTTTCTGCTTCTATAAGTATTAATAATTTACCAATAGGAGTATATACAATACGAGTATGTAAAAATGTTCCTATTAATCTTGCTGCTCCGGGGCCTGGCCAAGTAATATCTACAATTATTCTTACAACTACAGCAGTGATTAGTGGCACTATTATATTGACTATTAATCCTTCTGATATTGGTGCACAACCTGTAAGAGTATTTAACCCTAATTTAGTTATAGCACCTGCTACAGTTGCTTGGAGCAGTACAATACCTGGTGACATAGTTGCAAGAGGTGATGCAATGTCACTTTTTATAACTCCAGGTATTACGCAAAATGCTGTGTATACAGTATTCTTGCATACAGGAAATTAA

Tertiary structure

PDB ID
214a0fd865977e5b7cfb47bcc9065cfe581071dd4dfe7fdb0666a5d98bdcfc1c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6091
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50