Protein

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Genbank accession
APD20961.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MRKLTNFKFFYNTPFTDYQNTIHFNSNKERDDYFLNGRHFKSLDYSKQPYNFIRDRMEINVDMQWHDAQGINYMTFLSDFEDRRYYAFVNQIEYVNDVVVKIYFVIDTIMTYTQGNVLEQLSNVNIERQHLSKRTYNYMLPMLRNNDDVLKVSNKNYVYNQMQQYLENLVLFQSSADLSKKFGTKKEPNLDTSKGTIYDNITSPVNLYVMEYGDFINFMDKMSAYPWITQNFQKVQMLPKDFINTKDLEDVKTSEKITGLKTLKQGGKSKEWSLNDLSLSFTKLQEMMLSKKDEFKHMIRNEYMTIEFYDWNGNTMLLDAGKISQKTGVKLRTKSIIGYHNEVRVYPVDYNSAENDRPILSKNKDILIDTGSFLNTNITFNSFAQVPILINNGILGQSQQANRQRNAESQLITSRIDNVLNGSDPKSRFYDAVSVASNLSPTALFGKFNEEYNFYKQQQAEYKDLALQPPSVTESEMGNAFQIANSINGLTMKISVPSPKEITFLQKYYMLFGFEVNDYNTFIEPINSMTICNYLKCTGTYTIRDIDPMLMEQLKAILESGVRFWHNDGSGNPMLQNPLNNKFRVGV
Physico‐chemical
properties
protein length:587 AA
molecular weight: 68478,85400 Da
isoelectric point:6,69492
aromaticity:0,12606
hydropathy:-0,54480

Domains

Domains [InterPro]
IPR031772
3–115
IPR031772
APD20961.1
1 587
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage SCH111
[NCBI] 		1913582 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APD20961.1 [NCBI]
Genbank nucleotide accession
KY000085.1 [NCBI]
CDS location
range 8118 -> 9881
strand -
CDS
ATGAGAAAATTAACAAATTTTAAATTTTTCTATAACACACCGTTTACTGATTATCAAAATACGATTCATTTTAATAGTAATAAAGAGCGTGATGATTATTTTTTAAATGGACGTCATTTTAAATCATTAGACTATTCCAAACAACCGTATAATTTTATACGTGATAGAATGGAAATCAATGTTGATATGCAGTGGCATGACGCACAAGGGATTAACTACATGACGTTTTTATCAGATTTTGAGGACAGACGTTATTATGCGTTTGTAAATCAAATCGAATATGTGAATGATGTTGTGGTTAAAATATATTTTGTGATTGATACTATTATGACGTACACGCAAGGTAATGTATTAGAGCAACTCTCAAACGTTAATATTGAACGTCAACACTTATCAAAACGCACGTATAACTATATGTTACCAATGTTACGTAACAATGATGATGTGTTAAAAGTATCAAATAAAAACTATGTGTATAACCAAATGCAACAGTATTTGGAAAATTTAGTGTTATTCCAGTCAAGCGCTGATTTATCAAAGAAATTTGGTACGAAAAAAGAGCCAAACTTAGATACGTCTAAGGGTACGATATATGACAATATCACATCACCAGTCAACTTATACGTTATGGAATATGGTGACTTTATTAACTTTATGGATAAAATGAGTGCATATCCATGGATTACACAAAACTTTCAAAAGGTTCAAATGTTACCTAAAGACTTTATTAATACAAAAGATTTAGAGGACGTTAAAACAAGTGAAAAAATTACTGGATTAAAGACGTTAAAACAAGGTGGAAAATCAAAAGAATGGAGTTTAAACGATTTATCATTAAGTTTCACAAAGCTTCAAGAAATGATGTTGTCTAAAAAAGACGAGTTTAAACATATGATACGTAATGAGTACATGACGATTGAATTTTACGATTGGAACGGGAATACGATGTTACTCGACGCTGGTAAGATTTCACAAAAAACAGGTGTTAAGTTACGTACAAAGTCAATCATTGGTTATCATAATGAAGTGCGAGTTTATCCAGTAGATTATAACAGTGCTGAAAATGATAGACCGATACTTTCTAAAAATAAAGATATATTAATTGATACAGGTTCATTCTTAAATACAAATATAACATTTAATAGTTTTGCGCAAGTCCCTATATTAATTAATAACGGAATTTTAGGGCAATCACAACAAGCCAATAGACAGCGTAATGCAGAAAGTCAATTAATCACAAGTCGTATAGATAATGTATTAAATGGTAGTGACCCAAAATCACGTTTTTATGACGCTGTAAGTGTGGCAAGTAATTTAAGTCCAACGGCTTTATTTGGTAAATTTAATGAAGAATATAATTTCTACAAACAACAACAAGCAGAATATAAAGATTTAGCCTTACAACCGCCCTCAGTGACTGAATCAGAAATGGGAAACGCATTTCAAATCGCAAATAGTATTAATGGTTTAACTATGAAGATTAGTGTACCGTCACCTAAAGAAATTACATTTTTACAAAAATATTATATGTTGTTTGGTTTTGAAGTGAATGACTATAACACATTTATTGAACCAATTAACAGTATGACTATATGCAACTATTTAAAATGTACAGGTACGTATACAATACGTGACATTGACCCTATGTTAATGGAACAATTAAAAGCGATTTTGGAATCTGGTGTGAGATTTTGGCATAATGACGGTTCAGGTAATCCAATGTTACAGAACCCGTTAAACAATAAATTTAGAGTAGGTGTATAA

Tertiary structure

PDB ID
17b9631a166e34ea2526f9b81807b2570dbe76a4daa1010c792cf9c4d6ef78f0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3941
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Antibacterial composition for prophylaxis and treatment of hospital infections (variants), strains of bacteriophages, used for obtaining thereof Aleshkin,A.V., Volozhantsev,N.V., Verevkin,V.V., Krasilnikova,V.M., Myakinina,V.P., Popova,A.V. and Svetoch,E.A. 2016-10 — GenBank