Protein

View in Explore
Genbank accession
AUS02788.1 [GenBank]
Protein name
pectin lyase fold/virulence factor
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MTTRVSNDLIGGPAGPDGSSLLVTATDSTTARTLGDHFADAVNVKDFGAVGDGVTDDTVAIELAISSGRTVLIPDGYDCLINPITIDIDNTDIRISRSASISINVVSENSGITITGSYVSITGGTIKASTENVYFTNYLVYANDAFAVTISGVRIYYPQKSSYVGDGFNIPYNKGVLGLRAPNSIIENCVIYNGEGAGIYNYRENNTIQGNRVFNNILGIALAYGNSVGFGDNVIVDANHIYDNNACLDYSGADGILSWRDTRGHSIVNNIISGSGEHGTYIQSRDNSVVGNTVFGNRDSGIKCGGGKGSVISSNVCYDNGVGADNGDGSELYVQSPFGNMTINGNSCSNNVTGTGSFGIRVVWLEDKADPSSEDNVVVSNNVVSGTFVNGDMRLSGNGNFTVTGNKCVGQLSISQSTTSQPTMDYVNVSNNNVDVLYIDKISNCLVTSNYMNDLELSSSGQKTIIKDNIMRGQTSRLNMNDWDEISGNRITFTGSDSLLLQGSNAASCSYKRVINNVFDTNQPIIDFTSEGVSGDHITLQNNEFSVNSTNSLLIAGWCKYCLITGNRSPIPGTVTNLRNGTDTGYNIVTNNIGDNFSVGTTDIKENNIEF
Physico‐chemical
properties
protein length:611 AA
molecular weight: 64941,64420 Da
isoelectric point:4,44284
aromaticity:0,07529
hydropathy:-0,19149

Domains

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 2.275.O._10N.286.54.E11
[NCBI] 		1881285 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUS02788.1 [NCBI]
Genbank nucleotide accession
MG592671 [NCBI]
CDS location
range 122188 -> 124023
strand -
CDS
ATGACAACTCGCGTATCGAATGATTTAATTGGTGGTCCAGCCGGCCCAGATGGATCTAGTTTACTAGTTACTGCTACTGACTCAACAACTGCTAGAACTTTAGGTGATCACTTTGCTGATGCTGTAAACGTAAAGGATTTTGGAGCTGTTGGTGATGGCGTTACTGATGATACTGTTGCTATTGAGTTAGCTATATCAAGCGGGAGAACAGTTTTAATTCCTGATGGTTATGATTGTCTAATTAACCCTATTACTATTGATATTGATAACACTGACATACGCATATCAAGATCAGCATCAATAAGCATAAACGTTGTGAGTGAGAACTCAGGAATTACAATCACAGGGTCATATGTGTCAATAACAGGAGGAACTATTAAAGCCTCAACTGAAAATGTGTATTTTACTAACTATCTCGTATATGCTAATGACGCATTTGCAGTTACTATATCAGGAGTTAGGATATATTATCCACAGAAATCATCATATGTTGGTGATGGATTTAATATACCATACAACAAAGGAGTTCTTGGACTGCGTGCGCCTAACTCGATTATTGAGAATTGCGTTATATATAACGGGGAAGGTGCTGGCATTTATAATTATAGAGAAAATAATACAATACAAGGAAATCGAGTTTTTAATAATATTTTAGGAATTGCGTTAGCTTATGGTAATAGTGTAGGTTTTGGTGATAATGTGATTGTGGATGCAAACCACATATACGATAACAATGCGTGTTTGGATTACTCGGGTGCGGATGGCATATTATCATGGAGAGATACTAGAGGGCACTCGATAGTTAATAATATAATATCAGGTAGTGGTGAGCACGGAACATACATACAATCAAGGGACAATTCTGTTGTTGGTAATACTGTCTTTGGCAATAGAGATTCAGGTATAAAATGTGGGGGAGGTAAAGGATCAGTAATATCTAGTAATGTCTGCTATGATAATGGAGTTGGTGCTGATAACGGTGATGGCAGTGAACTATATGTGCAATCTCCATTTGGAAATATGACTATTAATGGAAATTCATGCTCTAACAATGTTACTGGTACTGGTTCTTTTGGTATACGAGTTGTCTGGTTGGAAGATAAAGCTGACCCATCTAGCGAAGATAATGTTGTAGTATCGAATAATGTGGTTAGCGGCACTTTTGTTAACGGCGATATGCGTTTATCAGGAAATGGCAATTTTACTGTTACTGGGAACAAATGTGTTGGTCAATTATCGATATCACAATCTACTACATCACAACCTACTATGGACTATGTAAATGTTTCAAATAACAATGTTGATGTTTTGTACATTGATAAGATTTCCAACTGCCTAGTAACAAGCAATTACATGAATGATTTAGAACTATCGTCATCTGGTCAGAAAACTATCATCAAAGACAACATAATGCGCGGCCAAACCTCAAGACTAAACATGAATGACTGGGATGAAATATCTGGTAATAGGATAACATTTACAGGGTCTGATTCGCTATTACTTCAAGGAAGTAATGCTGCATCATGTAGTTATAAGAGGGTTATTAACAACGTATTTGATACTAATCAACCTATAATTGATTTTACTTCTGAGGGAGTCTCTGGGGACCATATAACGTTACAAAATAATGAGTTTTCTGTAAATTCAACAAATTCACTACTAATTGCAGGATGGTGCAAGTATTGCTTAATTACTGGTAATCGATCCCCGATACCTGGAACGGTTACAAATCTTAGAAATGGAACTGATACTGGATACAATATAGTTACAAACAATATCGGAGATAACTTTAGTGTTGGAACAACTGATATAAAAGAAAACAACATAGAATTTTAA

Tertiary structure

PDB ID
8c757f072c744ed7b52b32c7ddb6f4a2c228dfd0176e66079a57d095f8e90ef8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8388
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank