Protein

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Genbank accession
CAB4178726.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,91
TF
Evidence Phold
Probability 1,00
Protein sequence
QGTVGSQGTDGTQGTVGSQGTDGTQGTVGSQGTDGTQGTVGSQGTDGTQGTEGSQGTQGTDGAQGAEGSQGLDGDVYSTTSGSALTLASSGTQTIYLEGVNLDYSTGQDIVIAKVGDLTEIQYAQVITYNSGSGALLLNKVRSVGTGAKNAGETPGYWAVNLDGAVGIEGAQGTVGSQGTDGTQGSVGSQGLDGTQGTVGSQGTDGTQGTQGTEGTQGTIGSQGTDGLGITFRGTYNGGTQYYVNHVVNYEGSSWVCIQTIDGVAPSESIYWTLYAAQGTQGTTGSQGLDGTQGTVGSQGTDGTQGTVGSQGTVGSQGAVGSQGLDGAQGTVGSQGTDGTQGTQGTDGAQGTVGSQGTDGTQGIEGSQGIQGAEGSFGGVTVQYYIDTTSYTVSDPGDNYIKFNNATISSATHLVIDDNPLDGNFDLSPFLSTIDDSTSTIKGHVKISKKYDATTFALFTISAVNHVGPGAASYHDVSVEYVSGNGSFSDNDETLLTFARTGDIGATGAQGTDGTQGANGTQGTVGSQGAVGSQGLDGTQGTVGSQGTVGSQGTIGSQGLDGTQGAVGSQGTTGTQGTTGSQGTDGTQGTIGSQGTIGATFPTYYAELNPLGGGIATDGSFVNQTTTFTVTGGPDGYESPNRVTLIVTGGSCSYTGYITGVTPSVGTTTFQVYVDGYTGTSSGAQVDWYMSLSGIKGIQGTTGSQGTDGTQGTVGSQGTVGSQGTVGSQGTDGTQGTIGSQGTIGSQGTDGQAGADGDVYSTTSDSALTLSNSGSTTITLNDLNVDYTVGQNVVIAHDTNNIQYGIVSEYNSGTGVLSFVRTKHTGTGNVSTSSAYWSVNLDGAVGIAGAQGTTGTQGADGTQGTVGSQGANGTQGTVGTQGTVGSQGTVGSQGTVGSQGTLGSQGTLGSQGTIGAQGVSGQLGTAAATITPASPYTAKLFTIAHNLGTVDIMVTVWEVATKSEVVTDILYIDTNSVTIGFAVAPALGETYRVVVKA
Physico‐chemical
properties
protein length:997 AA
molecular weight: 97811,88460 Da
isoelectric point:4,05003
aromaticity:0,05717
hydropathy:-0,29549

Domains

Domains [InterPro]
IPR050149
6–922
IPR050149
IPR008160
17–75
IPR008160 IPR008160 IPR008160 IPR008160 IPR008160 IPR008160
CAB4178726.1
1 997
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4178726.1 [NCBI]
Genbank nucleotide accession
LR796981 [NCBI]
CDS location
range 3 -> 2996
strand +
CDS
CAAGGCACTGTTGGCTCACAAGGTACAGATGGAACTCAGGGTACAGTCGGTAGCCAAGGAACAGATGGAACTCAAGGCACAGTTGGTTCGCAAGGTACTGATGGTACCCAAGGAACCGTAGGCTCACAGGGAACTGATGGAACTCAGGGAACTGAAGGTAGCCAAGGTACCCAAGGTACTGATGGAGCGCAAGGTGCGGAAGGTTCTCAAGGTCTTGATGGAGACGTATACTCCACTACATCTGGAAGTGCATTAACTCTTGCAAGTTCTGGTACACAGACTATTTATCTTGAAGGCGTTAACTTAGATTACTCAACTGGTCAAGATATTGTTATTGCTAAAGTTGGCGACCTAACAGAAATTCAATACGCTCAAGTTATTACTTACAACAGTGGCTCTGGAGCGTTGTTATTAAACAAGGTTCGCTCTGTTGGAACTGGCGCTAAGAACGCTGGAGAGACACCAGGATACTGGGCAGTAAACCTTGACGGTGCTGTTGGTATTGAGGGTGCACAGGGAACAGTAGGTTCTCAAGGAACTGACGGAACACAAGGTTCAGTAGGTTCACAAGGTTTAGACGGTACACAAGGAACAGTAGGTTCCCAGGGTACTGATGGAACGCAAGGCACTCAAGGAACAGAAGGAACTCAAGGAACGATTGGTTCTCAAGGAACTGATGGTCTTGGAATTACTTTCCGTGGAACATACAATGGCGGAACGCAATACTACGTAAACCATGTTGTTAACTATGAGGGCTCTTCATGGGTTTGTATTCAAACAATTGATGGAGTAGCACCAAGTGAAAGTATCTATTGGACTCTATACGCTGCTCAAGGTACACAAGGAACTACAGGCTCTCAAGGCTTAGATGGTACCCAAGGTACAGTCGGTTCTCAGGGTACTGACGGCACACAGGGAACTGTTGGTAGCCAAGGTACTGTTGGTAGCCAAGGAGCAGTCGGTAGCCAAGGTCTTGATGGAGCACAGGGAACTGTTGGTAGCCAAGGTACAGATGGCACACAAGGTACTCAGGGTACAGATGGAGCGCAGGGAACTGTAGGTTCTCAGGGTACTGACGGTACTCAAGGTATTGAAGGTTCACAAGGTATTCAAGGTGCTGAAGGTTCATTCGGTGGTGTAACTGTACAGTACTACATTGACACTACTAGTTACACTGTTTCCGACCCAGGTGACAACTACATTAAGTTTAATAACGCAACAATCTCAAGTGCAACTCATTTAGTAATTGATGACAATCCACTTGATGGAAACTTTGATTTATCCCCATTCTTAAGCACAATTGATGACTCTACATCAACTATAAAGGGTCACGTCAAGATATCTAAAAAATATGACGCAACTACATTTGCTTTATTTACAATCTCTGCGGTTAACCATGTTGGCCCAGGAGCGGCTTCGTATCACGATGTAAGTGTTGAGTATGTCTCTGGTAATGGTTCGTTCTCTGATAATGATGAAACACTTCTAACATTTGCTCGTACAGGTGACATTGGTGCGACTGGTGCTCAAGGTACTGATGGTACTCAAGGAGCAAACGGTACCCAAGGTACTGTTGGTTCACAGGGTGCTGTTGGTAGCCAGGGTCTAGATGGAACCCAAGGAACCGTAGGTTCACAGGGTACTGTTGGCTCACAGGGAACAATTGGTAGCCAGGGTCTTGATGGTACTCAGGGAGCCGTAGGTTCTCAAGGAACTACAGGAACTCAGGGAACAACTGGTAGCCAGGGTACAGATGGTACGCAGGGCACAATTGGTTCTCAAGGTACTATTGGAGCAACATTCCCAACATACTACGCAGAACTTAATCCTCTTGGTGGAGGAATTGCAACAGATGGAAGTTTTGTAAACCAAACTACAACATTTACTGTTACTGGTGGTCCAGATGGCTATGAATCTCCAAACCGTGTAACTCTTATTGTTACTGGTGGGTCATGTTCTTACACAGGTTACATCACAGGTGTAACCCCTAGTGTTGGAACAACTACATTCCAAGTTTATGTTGATGGTTACACTGGCACAAGTAGTGGAGCCCAAGTTGATTGGTACATGTCCTTATCTGGTATCAAGGGTATCCAAGGCACAACTGGTTCCCAAGGTACAGATGGAACCCAGGGTACTGTTGGCTCACAAGGTACAGTAGGTAGCCAGGGTACAGTAGGTAGCCAAGGTACTGACGGAACTCAGGGAACGATCGGTAGCCAAGGAACTATTGGTAGCCAAGGTACTGACGGTCAAGCAGGTGCTGATGGTGATGTTTACTCAACAACATCTGACTCTGCACTAACGCTTTCAAATTCTGGCTCTACAACAATTACTCTTAATGACCTAAATGTTGATTACACAGTAGGTCAGAACGTTGTAATCGCCCACGATACTAATAACATTCAGTACGGTATTGTTTCTGAATATAACTCTGGTACTGGAGTTCTAAGTTTTGTTAGAACCAAGCACACAGGTACAGGAAACGTATCTACCTCTTCAGCCTACTGGTCTGTAAACCTAGATGGTGCAGTCGGTATTGCAGGAGCACAAGGTACAACTGGTACTCAAGGAGCCGATGGCACACAGGGAACCGTGGGTTCACAAGGTGCAAACGGAACTCAGGGTACAGTGGGTACTCAAGGAACTGTAGGTAGCCAAGGCACTGTTGGTAGCCAAGGCACTGTTGGTAGCCAAGGTACTCTAGGTAGCCAGGGTACATTAGGTAGCCAAGGAACTATCGGTGCACAAGGTGTCTCTGGTCAACTTGGTACTGCTGCGGCAACTATTACTCCAGCATCTCCATACACCGCTAAGTTGTTTACTATTGCTCACAATTTAGGAACTGTAGATATTATGGTTACAGTTTGGGAAGTTGCAACTAAATCTGAAGTTGTAACAGACATCCTCTACATTGATACCAATAGTGTAACTATTGGATTTGCAGTGGCTCCAGCATTGGGTGAAACCTATCGAGTCGTAGTAAAGGCCTAA

Tertiary structure

PDB ID
7a21978bb35942a3c11f780df6fd92e0d7a44fc2b97b0016a35f7e8d00eb3149
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2565
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50