Protein

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Genbank accession
QBX24579.1 [GenBank]
Protein name
hyaluronate lyase
RBP type
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MPETISAILVHKSMTKNEWESSDIILPQGQLVYESDTGHSKFGDGKNRYADLIYQGGPPGPQGPQGPTGKTGEQGPPGPTGRRGETGPQGPPGLQGPPGADGKMTFEQLTPEQKQQLKGDKGDRGPKGDIGPRGLTGPQGPKGEPGINGMDGPRGATGPQGPPGPAASIPDDVVRRGELAAYLLRSEYKAKGTGSGLSYKVVTQSEYDELYDYSDNELILVVEG
Physico‐chemical
properties
protein length:224 AA
molecular weight: 23418,63450 Da
isoelectric point:5,06074
aromaticity:0,05357
hydropathy:-0,89420

Domains

Domains [InterPro]
SSF69349
8–224
SSF69349
PTHR24637
55–165
PTHR24637
IPR008160
57–103
IPR008160 IPR008160
G3DSA:1.20.5.320
75–121
G3DSA:1.20.5.320
QBX24579.1
1 224
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan192
[NCBI] 		2548040 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX24579.1 [NCBI]
Genbank nucleotide accession
MK448870 [NCBI]
CDS location
range 27015 -> 27689
strand +
CDS
ATGCCAGAGACTATATCAGCTATACTTGTGCATAAAAGCATGACAAAAAACGAGTGGGAGTCTAGTGACATCATTTTGCCACAAGGCCAGCTCGTCTATGAGTCTGACACAGGCCATAGTAAATTTGGCGACGGTAAAAATAGATATGCAGATTTAATCTATCAAGGTGGACCACCTGGACCACAAGGTCCCCAAGGACCAACAGGTAAAACAGGAGAGCAGGGCCCACCAGGCCCTACCGGTCGACGTGGGGAAACAGGCCCACAGGGTCCTCCCGGACTCCAAGGTCCACCGGGTGCTGACGGTAAAATGACTTTTGAGCAATTGACGCCAGAGCAAAAGCAACAACTAAAAGGCGACAAAGGCGACCGCGGCCCTAAAGGGGACATTGGTCCTAGAGGGCTAACGGGCCCGCAAGGCCCTAAAGGAGAGCCAGGGATAAATGGTATGGACGGTCCAAGAGGTGCAACGGGTCCCCAAGGTCCGCCAGGTCCAGCTGCGAGCATACCTGACGATGTGGTCAGACGGGGTGAGTTAGCAGCTTACCTGCTGCGGTCGGAATACAAAGCCAAAGGCACAGGATCTGGCCTAAGCTACAAAGTTGTCACTCAATCAGAGTACGACGAGTTATATGATTACAGTGACAATGAGTTGATCCTCGTTGTGGAGGGGTGA

Tertiary structure

PDB ID
16be90449a2115c27ca9193a924f1eb15063aa305674bd5c1c0dc1774bd24265
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7909
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank