Protein

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Genbank accession
QOV06126.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MATPTVVATGNGTTKAFDLTFPYLRKEHVKVYVNGDLKPFTWLNSTRINITTAPASGTTITIRRETPEVPLSTLVNNKPISAEIYMELLLQAIYFAQERPGVAGMQGPTGPAGPQGERGIQGIQGIQGPVGPIGPAGPQGVQGIKGDTGSQGPVGPQGAQGLRGLTGATGAQGVQGPQGTVGPQGSVGPQGVKGDKGDKGDKGDTGADGRSFTVQATGTLAERDAFNGELAGFSYLATDTGNLYIRQGSAGWSDPIPFGKGDKGDKGEKGDQGIQGEIGPEGPQGPLGSEGPQGVQGIQGPKGEQGETGPQGPQGLKGDVGPAGPTDFNLLTNKPSTFPPSAHDHNSTYYTKSEIDAKLALLAPKANPSFTGTLTCAAIDASGAITAEGNISAYT
Physico‐chemical
properties
protein length:395 AA
molecular weight: 40041,89840 Da
isoelectric point:5,24802
aromaticity:0,05570
hydropathy:-0,47291

Domains

Domains [InterPro]
IPR005604
6–98
IPR005604 IPR008160 IPR008160
IPR050938
100–326
IPR050938
QOV06126.1
1 395
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage Pasto
[NCBI] 		2767575 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QOV06126.1 [NCBI]
Genbank nucleotide accession
MT708545.1 [NCBI]
CDS location
range 37618 -> 38805
strand +
CDS
ATGGCAACACCTACTGTCGTGGCAACCGGAAACGGCACGACCAAAGCATTCGACTTGACTTTCCCGTATCTCCGCAAGGAACACGTCAAGGTATATGTGAACGGCGACCTCAAGCCCTTCACTTGGCTCAACTCCACCCGCATCAACATCACGACGGCCCCGGCCTCCGGCACCACCATCACCATCCGGCGAGAGACGCCCGAGGTGCCACTATCGACCCTCGTGAACAACAAGCCGATCTCCGCCGAAATCTACATGGAGCTTCTGCTACAGGCGATTTACTTCGCCCAAGAGCGTCCCGGTGTGGCCGGTATGCAGGGTCCGACTGGCCCTGCTGGTCCGCAGGGTGAGCGCGGTATTCAGGGTATTCAGGGTATTCAGGGTCCCGTAGGTCCGATTGGACCGGCTGGTCCGCAGGGCGTTCAGGGTATCAAAGGTGACACCGGCTCTCAGGGGCCAGTGGGTCCGCAGGGCGCTCAGGGCCTCCGAGGTTTGACCGGTGCGACCGGCGCTCAGGGCGTTCAGGGTCCGCAGGGCACCGTGGGTCCGCAAGGCTCGGTCGGCCCGCAAGGTGTCAAGGGCGACAAGGGTGATAAGGGCGACAAGGGCGACACTGGCGCTGACGGGCGATCCTTCACCGTTCAGGCGACCGGCACCCTAGCCGAGCGGGATGCCTTCAACGGCGAACTGGCTGGCTTCTCCTATCTCGCGACCGACACCGGCAACCTCTACATTCGTCAAGGGTCCGCTGGCTGGTCCGATCCGATCCCCTTTGGCAAAGGCGATAAGGGTGACAAAGGCGAGAAAGGCGATCAGGGCATTCAGGGTGAAATCGGCCCCGAAGGTCCGCAGGGTCCTCTAGGCTCGGAAGGTCCGCAGGGTGTTCAGGGCATCCAAGGCCCCAAGGGCGAACAAGGCGAAACCGGCCCGCAGGGTCCGCAGGGATTGAAGGGTGACGTTGGACCGGCTGGCCCGACTGATTTCAACCTACTGACGAACAAGCCTTCGACATTTCCGCCCTCGGCTCACGACCACAACTCGACCTACTACACCAAATCGGAGATCGACGCGAAGCTCGCGCTTCTCGCTCCCAAGGCCAACCCTTCCTTCACTGGAACCCTCACGTGCGCAGCCATCGACGCCTCCGGCGCGATCACCGCAGAGGGCAACATTTCGGCATACACATAA

Tertiary structure

PDB ID
124710f6b9d8f0a637ffb6aba2f43a195f3bca431e198d626c08690ac78af2c3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7240
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Rhizobium japonicum phage Pasto Manuel,N.S., Ravindran,A., Newkirk,H., Gonzalez,C., Young,R. and Liu,M. 2021-01-21 — GenBank