Protein

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Genbank accession
CAB4217578.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,87
TF
Evidence Phold
Probability 1,00
Protein sequence
MSGPLGFGGGGNTIGTGATGASGIAGSTGITGATGVTGSTGIFGATGINGATGLSGSTGITGATGIVGPTGISGATGLTGLSGSTGITGQDGPRGATGISGPVGSTGFVGATGASGATGLAGATGIGASGVSGATGPQGVDGPRGSTGISGPTGLTGPTGATGIIGATGLLGATSVVPGPTGPTGMTGGEGPRGVTGSTGLIGATGLTGIGFSIAKVYASVALLTADFAPVGINPGQFAIINNNNVNDPENSRLYLWDGYSYIYIDDLSGAQGITGPSGISGPSGPASTTPGPAGATGITGATGISGTIGIDGVNGATGLTGATGASGANSTVAGPAGATGPAGATGITGITGSTGADSTVPGPTGATGVVGATGFVGATGASGITGASGTIGATGITGSTGADSTVPGPTGATGPTGIAGSTGIIGPTGITGSTGITGPTGITGSTGADSTVPGPTGITGPTGITGPTGLSGPTGITGATGLSGSTGITGPTGITGSTGFTGATGIGATGANSTVPGPTGATGITGATGPANTGATGPTGATGPQGEIGLNGPAVFSKTFNYIGQIYPNFFSNNFWYPDTTIQIGYVSVSVGVSPRLTPTGTWGMVLNILTGYPYTGYWSIAATNTFSFVGVGSSTYWPIGVTVPTGSGVSISVDSIDAGASDLIVTFYYYRVG
Physico‐chemical
properties
protein length:675 AA
molecular weight: 61761,98720 Da
isoelectric point:4,05003
aromaticity:0,05481
hydropathy:0,24933

Domains

Domains [InterPro]
IPR008160
68–119
IPR008160 IPR008160 IPR050149
IPR008160
455–506
IPR008160
CAB4217578.1
1 675
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4217578.1 [NCBI]
Genbank nucleotide accession
LR797456 [NCBI]
CDS location
range 39492 -> 41519
strand -
CDS
ATGAGTGGCCCACTAGGTTTTGGCGGCGGCGGTAATACCATTGGAACCGGAGCAACTGGTGCCAGTGGTATTGCTGGTTCAACTGGAATCACTGGCGCTACTGGAGTAACTGGTTCAACAGGTATTTTTGGCGCTACAGGAATAAACGGCGCGACTGGACTCTCTGGTTCAACTGGAATTACCGGCGCGACTGGAATTGTTGGCCCTACCGGAATATCTGGCGCTACGGGTCTCACTGGACTCTCTGGTTCTACAGGTATTACTGGTCAAGATGGCCCTAGAGGCGCAACTGGAATAAGTGGCCCGGTTGGTTCGACAGGATTTGTTGGAGCGACTGGAGCATCTGGCGCTACAGGCCTCGCTGGTGCAACTGGAATTGGTGCATCAGGAGTAAGTGGAGCAACTGGCCCACAAGGAGTAGACGGCCCTAGAGGTTCTACTGGAATAAGTGGCCCGACAGGATTGACTGGCCCGACAGGTGCCACAGGAATAATTGGCGCAACTGGACTCTTGGGCGCTACTTCTGTTGTTCCCGGCCCTACTGGCCCTACGGGGATGACTGGTGGAGAAGGCCCGAGAGGCGTAACTGGTTCCACAGGTCTGATCGGGGCAACTGGACTGACTGGAATAGGTTTTTCCATTGCAAAAGTTTACGCTTCTGTTGCTCTTCTTACCGCAGATTTCGCACCTGTAGGAATAAATCCCGGCCAATTTGCAATAATTAACAATAATAACGTAAATGATCCAGAAAATTCTAGGTTGTATCTGTGGGATGGCTACTCTTACATCTATATTGATGATCTTTCTGGCGCACAGGGAATAACTGGCCCTAGCGGCATTTCCGGCCCTAGCGGCCCTGCTTCGACAACTCCCGGCCCTGCGGGCGCGACTGGAATTACTGGTGCGACAGGCATTTCTGGCACTATTGGCATTGATGGAGTAAATGGCGCAACAGGTCTTACTGGCGCAACTGGAGCATCTGGCGCTAATTCAACAGTTGCTGGCCCCGCTGGCGCGACTGGCCCTGCTGGCGCTACGGGAATTACAGGAATAACTGGTTCAACTGGTGCGGATTCAACAGTTCCCGGCCCCACCGGCGCTACAGGGGTTGTTGGTGCGACAGGATTTGTTGGCGCTACTGGTGCATCTGGAATAACTGGCGCTAGTGGAACAATCGGCGCTACAGGAATAACTGGTTCGACTGGTGCGGATTCAACAGTTCCCGGCCCTACTGGCGCTACTGGCCCAACTGGAATTGCCGGATCAACTGGAATCATTGGCCCAACTGGAATAACTGGTTCAACTGGAATCACTGGCCCAACTGGAATAACTGGTTCAACTGGTGCAGATTCAACAGTTCCCGGCCCAACGGGGATAACTGGCCCAACGGGGATAACTGGCCCAACTGGACTATCTGGCCCAACTGGAATAACTGGTGCGACTGGACTATCTGGATCAACCGGAATTACCGGCCCAACCGGAATTACCGGATCGACTGGATTCACTGGTGCAACTGGAATTGGCGCTACTGGCGCTAACTCAACAGTTCCCGGCCCAACTGGCGCTACGGGAATAACTGGCGCTACCGGCCCCGCAAACACTGGCGCTACCGGCCCAACTGGCGCTACCGGCCCGCAAGGTGAAATAGGCTTGAACGGCCCAGCCGTATTTTCAAAAACATTTAATTACATAGGTCAAATATACCCTAACTTTTTTTCTAATAATTTTTGGTACCCAGACACTACCATACAAATCGGATATGTAAGTGTCAGCGTAGGAGTTTCCCCTAGACTTACTCCAACTGGTACTTGGGGTATGGTTTTAAATATCTTAACTGGCTATCCTTATACAGGATATTGGTCGATTGCAGCAACAAATACATTTAGTTTTGTTGGAGTAGGCTCAAGTACGTACTGGCCGATAGGTGTTACTGTTCCAACAGGTTCAGGTGTTAGTATTTCCGTAGACTCTATTGATGCCGGTGCCTCTGATCTCATAGTGACTTTTTACTACTATAGAGTAGGATAA

Tertiary structure

PDB ID
750db23a512ebffaf326325966e5f4600b30e1e6cf05b0e316049829f1678bf9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5939
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50