Protein

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Genbank accession
QDH50467.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,58
TF
Evidence Phold
Probability 1,00
Protein sequence
MSNILTNNINPRSGNKITIGGVNDTVSIAGTVTYEDVTNVDSVGVITARSGIEVTGGTVNIGAETSGRKILYINSSDNGAAVILRADAATRARMEVPDGSSDLIFGVETAATPTERMRITGIGSVGIGTDAPGSILEVASDGIARINSTFSGSAHIGMSVGGSGGGFVLTDGHFMAINHQPYTDRSSDNNLTERLRIDDEGRLLVGRTTANTSGIGTLAKLYVTSPAVTGTASTVYVAKFSGNTSASSSHALISCVAGYSPAANDTEGHVHFGAAREGSGNQGAFIVKTGTTRSERLRIKSNGDITFGQNGGGFYTVIKTCPANTSTNIFRMDNSNGARCFTVYLTCSESSYSVSKIYHVACQYGSNPTLNLTADTGQYSPNHNFSMTGSVSGSLHTFAISQGNTASTIYATIVLGEMNYPLGFERL
Physico‐chemical
properties
protein length:427 AA
molecular weight: 44322,59490 Da
isoelectric point:6,13949
aromaticity:0,06557
hydropathy:-0,10187

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-B43
[NCBI] 		2484638 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDH50467.1 [NCBI]
Genbank nucleotide accession
MN018232.1 [NCBI]
CDS location
range 127 -> 1410
strand -
CDS
ATGTCAAATATTCTCACTAATAATATTAACCCTAGAAGTGGTAATAAGATTACTATTGGTGGGGTTAATGATACTGTATCTATTGCAGGTACAGTCACTTATGAAGATGTTACCAATGTAGATTCTGTTGGTGTCATTACAGCACGTAGTGGTATTGAAGTTACTGGTGGGACAGTAAATATTGGAGCCGAAACCAGTGGAAGAAAAATTCTCTATATTAATTCATCTGATAATGGTGCTGCTGTTATTTTAAGGGCAGATGCCGCAACAAGAGCACGTATGGAAGTTCCTGATGGGTCATCTGATTTAATTTTTGGTGTTGAAACTGCAGCTACACCAACAGAAAGAATGCGTATAACTGGTATTGGATCAGTCGGTATCGGAACTGACGCTCCAGGATCAATACTAGAAGTTGCATCTGATGGTATTGCTAGAATTAATTCTACTTTTTCGGGATCAGCACATATTGGAATGAGTGTCGGTGGTTCAGGTGGCGGATTTGTTTTGACTGATGGTCATTTTATGGCCATAAATCATCAACCATATACAGATAGATCATCTGATAACAATTTAACAGAAAGACTTCGCATCGATGACGAAGGTAGGTTATTGGTTGGTCGTACTACCGCAAATACAAGTGGTATTGGTACCCTGGCAAAGTTATATGTAACATCTCCAGCTGTTACTGGTACTGCCAGTACTGTTTATGTTGCTAAATTCTCAGGAAACACATCTGCAAGCAGCTCTCATGCACTAATTTCTTGTGTTGCTGGTTACTCACCTGCAGCCAACGACACTGAAGGACATGTGCATTTTGGTGCAGCGAGAGAAGGGTCTGGAAACCAAGGTGCGTTTATTGTAAAAACTGGTACTACTCGATCTGAGAGACTACGAATTAAATCTAATGGTGATATTACTTTTGGACAAAATGGTGGTGGATTTTATACCGTAATTAAAACATGTCCTGCAAACACTTCAACAAATATTTTTAGGATGGACAACTCAAACGGTGCTCGTTGTTTTACCGTTTATCTAACTTGTTCTGAAAGTTCTTATTCAGTATCAAAGATATATCACGTTGCATGTCAATATGGTAGTAATCCAACTCTTAATCTAACTGCAGATACGGGTCAATATAGTCCTAACCACAACTTCTCTATGACTGGGAGTGTGTCTGGTTCTTTACATACTTTTGCAATTTCTCAAGGAAACACTGCATCAACAATTTATGCAACTATTGTTCTTGGAGAAATGAATTATCCATTAGGATTTGAAAGACTCTAA

Tertiary structure

PDB ID
a9c91808d36fdb6bbba085c73b3b12be043968f51f1c88ecdffd5defa9f0a386
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7014
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, characterization and genome sequencing of the novel cyanophage S-B43 from the Bohai Sea, China Wang,M. 2020-10 — GenBank