Protein

View in Explore
Genbank accession
AEV52165.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTTPGASAPDGVYENGSDYGSDLTEDTAKAMVTQPFHTAYGGLPTQFKNGLGAFIQRAIDGNPENDPTIGEIADWFTGWNKVHTANAAKIVQIENRLAEGSTFMDDFGRPNNRSVLGNGWQQGGQGQGLGIIDNAARVDNTEGLIGVDSGRRWAICPVLAAENNVAVTAVVNPKGVATGTMTSLFVRANTGLTSFVYANVYGRSCYLGYGTRSGDSWTFTDWKSNTNYRLSEGASVELSAVDNVYSLTIDGAVVLQYEDTAGVIPVDATRRTVGFASETKIVNLLPSYSWGVAAFSHRPVQFVDVAANKEAIDQATEVASNAEAAAAAAMSAVVSLQNENTGASVDGVVIRDGFDVPGNNLGASWAQTGYGNFGVGSNPGRAMILAGTPPSLNTTLTYVARYITPLSTDNFNVSAVLANSGADYAEARSYVIGRCNADLSSFVYVRWSKSGGVEMGRGSAAESTVNLTKWTSDSRTVEGGAHVELRCVGNEYRVYINGSALLYYKDAANTVSVGPSNRYAGIGVTRYADYFAQWRDSAAIDSFAASDTLAKGSIQGTGWSLVRTNTNSTAVGNGAAPVPANTWDTERVRNGVTVEDLGAGIVKINREGWYAISLRLGHTQTAYQSGEYGSSRFDRQAVLYVAEPDSSSFTIARKGVMGADWDDGTDVAAMIYLKAGSRVRAGTNHNGYGPDIVGDAYNRCYFDGALTSSPQGLRGEQGEKGDKGDQGPMGEGLRFDYFVDLASQLPAAGPEGAHALVKENGRAYLFSQGAWQQGAVLIGPKGDPGVKGDPGSKGDPGSKGDPGVKGDKGDTGTAWTGTAAAYDALPTATRLAQGFVAVIV
Physico‐chemical
properties
protein length:840 AA
molecular weight: 88232,22530 Da
isoelectric point:4,95581
aromaticity:0,09167
hydropathy:-0,25571

Domains

Domains [InterPro]
Coil
319–339
Coil G3DSA:2.60.120.560 IPR050149
IPR055681
327–547
IPR055681
AEV52165.1
1 840
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhodococcus phage RER2
[NCBI] 		1109715 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Rhodococcus erythropolis
[NCBI] 		1833 Bacteria > Actinobacteria > Actinobacteria > Corynebacteriales > Nocardiaceae > Rhodococcus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AEV52165.1 [NCBI]
Genbank nucleotide accession
JN116827 [NCBI]
CDS location
range 15966 -> 18488
strand +
CDS
GTGACTACCCCAGGCGCATCGGCTCCAGACGGAGTATACGAAAACGGCAGTGACTACGGTTCTGACCTTACGGAAGACACCGCTAAGGCAATGGTCACTCAGCCTTTCCACACCGCATACGGCGGTCTACCAACACAATTCAAGAACGGGCTGGGCGCGTTCATCCAACGAGCAATAGATGGTAACCCCGAGAACGATCCGACTATCGGAGAGATTGCAGACTGGTTTACCGGCTGGAACAAGGTTCACACCGCGAACGCGGCGAAGATAGTTCAGATCGAGAACCGTCTTGCCGAGGGTTCCACGTTCATGGACGACTTCGGGCGTCCGAACAACCGCAGTGTGCTTGGTAACGGCTGGCAGCAAGGCGGTCAGGGACAGGGTCTCGGCATCATCGACAACGCAGCTCGTGTGGACAACACCGAAGGTCTGATCGGTGTGGACTCTGGCCGGCGCTGGGCTATCTGCCCTGTTCTGGCAGCAGAGAACAATGTCGCTGTTACCGCTGTCGTCAACCCCAAGGGTGTGGCGACCGGCACCATGACCTCGCTGTTCGTCCGTGCCAACACCGGACTGACTTCGTTCGTCTACGCCAACGTCTACGGTCGGTCCTGTTACCTGGGATACGGCACCCGTTCGGGTGACTCCTGGACGTTCACGGACTGGAAGTCCAACACAAACTACCGACTGTCGGAGGGTGCCAGCGTCGAGCTGTCCGCAGTCGATAACGTCTACAGCTTGACAATAGACGGTGCTGTTGTCCTACAATACGAAGACACCGCTGGAGTGATCCCGGTGGACGCCACTCGGCGTACGGTCGGCTTCGCATCTGAGACGAAGATCGTTAACCTGCTCCCCTCTTACTCGTGGGGTGTAGCAGCCTTCTCCCATCGTCCCGTTCAGTTCGTGGATGTTGCGGCTAACAAGGAAGCGATTGACCAGGCTACTGAGGTAGCTAGTAACGCGGAAGCGGCTGCCGCAGCAGCAATGTCGGCTGTCGTCAGCTTGCAGAACGAGAACACCGGAGCATCGGTGGACGGTGTCGTGATCCGTGACGGATTCGACGTACCGGGCAATAACCTTGGTGCATCCTGGGCACAGACCGGTTACGGCAACTTCGGTGTCGGATCTAATCCGGGACGAGCGATGATCCTGGCGGGAACGCCTCCGTCGTTAAACACGACCCTGACCTACGTGGCTCGGTACATCACACCGCTGTCAACGGACAACTTCAACGTCTCTGCCGTCTTGGCGAACAGTGGCGCTGACTACGCAGAAGCCCGTTCGTACGTCATCGGTCGGTGCAATGCGGATCTCTCGTCGTTCGTGTACGTCCGATGGTCCAAGTCGGGTGGCGTGGAGATGGGACGCGGTTCGGCTGCCGAATCGACCGTGAACCTGACCAAGTGGACCTCTGACTCTCGCACTGTCGAGGGTGGAGCCCACGTCGAGTTGCGTTGTGTCGGTAACGAATACCGGGTCTACATCAACGGTAGTGCTCTGCTCTACTACAAGGACGCTGCCAACACTGTCTCTGTGGGACCGTCCAACCGGTACGCCGGCATCGGCGTCACCCGGTACGCGGACTACTTTGCACAGTGGCGTGACTCGGCGGCTATCGACAGTTTCGCAGCATCCGACACTCTGGCTAAGGGTTCGATCCAGGGCACAGGCTGGTCGTTGGTCCGCACGAACACAAATAGCACAGCAGTCGGTAACGGAGCTGCCCCGGTTCCAGCCAACACCTGGGATACCGAGCGGGTCCGCAACGGTGTGACGGTCGAGGATCTCGGCGCGGGCATCGTGAAGATCAACAGGGAGGGTTGGTACGCAATCTCCTTGCGCCTGGGACACACCCAGACGGCCTACCAGTCAGGTGAATACGGCTCCAGCCGATTCGATCGACAAGCGGTTCTCTACGTGGCAGAGCCCGACTCAAGTTCGTTCACTATCGCCCGTAAGGGTGTTATGGGAGCTGACTGGGACGACGGTACAGACGTAGCAGCGATGATCTACCTCAAGGCCGGATCTCGCGTCCGGGCCGGTACGAACCACAACGGCTACGGCCCCGACATTGTCGGTGACGCTTACAACCGTTGCTACTTCGACGGTGCTCTCACGTCCAGCCCACAGGGCTTGCGTGGTGAACAGGGTGAGAAGGGCGATAAGGGCGACCAGGGTCCGATGGGCGAAGGACTTCGGTTCGACTACTTCGTTGATCTGGCCTCGCAGCTCCCGGCTGCCGGCCCCGAAGGGGCTCACGCTCTGGTGAAGGAAAACGGACGGGCTTACCTGTTCAGCCAGGGTGCTTGGCAACAAGGTGCAGTGCTCATCGGCCCCAAGGGCGATCCTGGCGTCAAGGGTGACCCAGGCTCGAAGGGTGATCCCGGAAGCAAGGGTGATCCTGGTGTGAAGGGTGACAAGGGTGACACCGGTACCGCTTGGACCGGTACTGCCGCTGCCTACGATGCTCTGCCCACCGCTACGCGGTTGGCTCAGGGCTTTGTGGCGGTGATCGTATGA

Tertiary structure

PDB ID
df108f5908b4140310ebfd85057d022dc3919eba6b2c5401434b705cd02c5756
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7563
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence and characterization of the Rhodococcus bacteriophages REQ1, RGL3 and RER2 Petrovski,S. 2012-11-06 — GenBank