Protein

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Genbank accession
QBQ72835.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence Phold
Probability 1,00
Protein sequence
MSNIFIPAGVRDKAMRDTLIAIVRELDKAGGGVTTSENDPDQYTPGADGDIIYSESSTSIWVFSSDTNNWVLVSGISTAQAAEGYTGTAEFTGTLYYQTIQSAQPNAPTAATWSIANSDFTSITPSGVWSHTQPAVNITDTAFREWSTNYTVNLDTSTNPIGVSITFSTPTGAIQVTDDIESDNYAAGSAGWAIRRDDGYAEFGSAAIRGTLTADQIGAGTITSGKIAAGAVDASKIAANTITANKLSSSSISGLGLTIGTLSDASSGERIVISDNKIVVFDSNNNIRVKIGDLS
Physico‐chemical
properties
protein length:295 AA
molecular weight: 30709,23340 Da
isoelectric point:4,26016
aromaticity:0,07458
hydropathy:-0,10136

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage CRP-7
[NCBI] 		2559286 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBQ72835.1 [NCBI]
Genbank nucleotide accession
MK613349 [NCBI]
CDS location
range 32912 -> 33799
strand -
CDS
ATGAGCAATATATTTATACCAGCAGGTGTAAGAGACAAGGCTATGAGGGATACTCTCATTGCTATTGTAAGAGAATTAGATAAAGCAGGAGGTGGTGTAACTACTTCTGAGAATGATCCAGATCAATATACTCCTGGAGCAGATGGAGATATTATATACTCTGAAAGCTCTACTAGTATATGGGTTTTTTCTTCAGATACTAACAATTGGGTATTGGTTTCAGGTATATCAACAGCCCAAGCGGCTGAAGGTTATACTGGTACAGCTGAGTTTACAGGTACATTGTACTATCAAACTATTCAATCAGCACAACCTAACGCACCTACAGCGGCAACATGGAGTATAGCTAACAGTGACTTTACAAGTATAACACCTTCAGGTGTATGGAGTCACACTCAGCCAGCGGTTAATATTACTGATACTGCATTCAGAGAATGGAGTACTAATTATACAGTTAATCTAGATACGAGTACTAACCCTATAGGTGTGTCTATTACATTCAGTACACCCACAGGTGCTATACAGGTTACTGATGATATAGAAAGTGATAACTATGCTGCAGGCAGTGCAGGTTGGGCCATACGTAGAGATGATGGCTATGCAGAGTTTGGTTCAGCGGCTATTAGAGGTACTTTAACTGCTGATCAGATTGGTGCAGGTACTATAACTTCAGGTAAAATAGCGGCAGGAGCAGTTGATGCAAGTAAAATTGCAGCCAATACTATTACTGCTAACAAACTTTCTTCAAGTTCTATTTCTGGATTAGGTCTTACTATAGGTACTCTTTCTGATGCTAGTAGCGGGGAAAGGATTGTTATTAGCGATAATAAAATAGTAGTTTTTGATTCTAATAATAATATAAGAGTTAAAATAGGAGATTTATCTTAA

Tertiary structure

PDB ID
5b0d5ab2adb76b0017a2636e099bfda2eda8ee1b7e47d36cd458d542f0cd7f03
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6315
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diverse, abundant and novel viruses infecting the marine abundant Roseobacter RCA lineage Zhang,Z.F., Chen,F., Chu,X., Zhang,H., Luo,H.W., Zhai,Z.Q., Yang,M.Y. and Zhao,Y.L. 2019 — GenBank