Protein

View in Explore
Genbank accession
QBQ72580.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MAGYTRQSTSQIINGANITAPPLNAEFNQLASSFGVTGHTHDGTSGNAPKIDLATSVTGYLPATNGGTGGKNNLAATTNPGNGDDADDGYSRGSYWYNYTGDRWYICINNTVGSAVWREMLMVETGSVIEPGITGAVDLGSTTFKFKDTHLSGSMNSVSAAISGNITVGGTQTNTGAATFNGSATFNNITNFNGASNTIANAAITSGTINGTTIGGATAAAGTFTALTANNSANLTNATISGGTINNSVIGGTTPLNITGLTVAASTGFSGDLTGNVLGNVTGNLTGTVNATGGVIGDVTGNVTASSGSSTFNNVVINGSLDMDATTASTITGLSTPVNPTDASTKAYVDQQVALVLSSAPAALDTLNELAAAINDDANFATTVNNSIATKLSLSGGTMSGNIDLNSTNKITNMPTPSANSDGSNKGYVDTQRDTRLATTGGTMSGAINMNSQAITSLANPANSGDAANKFYVDSILGSATSAAASASTASALAAQASGSAANAQASEDEAQEWATKTTGTITGESEYSAKEYAIGTVIRGNIGSAKDWSTYTGGTVDGTNYSAKYWATNANIGTIASNIDDLVNVANDLSSGNFVAGQIYDFGSITDAASGTSGAPDGFIVTVANNLADVQTVSNVITNVNTVAGISANVTTVAGVSSAVSTLAAISSDVSAVAPIAANVTTVAGVSSDVTAVANNNANINTVVGQITPNNNISTLASIAGNISTVASVSVDVTTVAGISSNVTAVANNNANVTSVANIDSDVTAVAGIASDVTTAATNVTDITNFADVYQGPKATAPTQRNNNSSLVAGDLYFDTVSGFMRYYSGSSWSNITAPTGDMGNQNSTSVAITGGSITGITDLEIADGGTGASSAPAARTNLGLDTMATQAANNVAITGGTISVDFDFGSI
Physico‐chemical
properties
protein length:909 AA
molecular weight: 90200,82790 Da
isoelectric point:4,05003
aromaticity:0,05171
hydropathy:0,02035

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage CRP-3
[NCBI] 		2559282 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBQ72580.1 [NCBI]
Genbank nucleotide accession
MK613345 [NCBI]
CDS location
range 28577 -> 31306
strand -
CDS
ATGGCTGGCTATACCCGGCAATCTACCTCACAAATTATTAACGGCGCAAACATCACTGCGCCTCCGTTGAACGCTGAGTTTAACCAGTTGGCAAGCTCCTTTGGAGTAACTGGACACACGCACGACGGTACGTCAGGTAATGCCCCTAAAATTGATCTAGCTACCTCTGTGACGGGATATCTCCCGGCTACAAACGGCGGTACAGGCGGAAAGAATAACTTAGCGGCTACTACCAATCCCGGTAATGGTGACGACGCAGATGACGGCTATAGCCGGGGTTCTTACTGGTATAACTATACTGGTGACCGCTGGTATATTTGTATCAACAACACTGTAGGCTCCGCCGTATGGCGTGAGATGCTTATGGTTGAGACCGGGTCTGTAATTGAACCCGGTATCACTGGTGCAGTAGATCTTGGCTCCACAACCTTCAAGTTCAAAGACACCCATCTATCTGGGTCCATGAATTCCGTATCCGCAGCTATATCTGGCAACATAACGGTAGGGGGTACGCAGACTAATACTGGTGCCGCCACTTTTAATGGCTCGGCTACATTCAACAACATCACAAACTTTAACGGCGCATCGAATACTATTGCCAATGCGGCTATCACATCTGGTACCATTAATGGGACTACAATTGGTGGAGCCACTGCCGCTGCCGGTACATTCACGGCGTTGACTGCTAACAACTCCGCTAACCTGACTAATGCTACTATATCCGGCGGTACAATCAACAACAGCGTGATTGGTGGTACTACGCCACTAAACATCACAGGACTTACTGTAGCGGCCTCTACAGGCTTCTCAGGAGACCTCACTGGTAACGTACTGGGCAATGTTACAGGCAACCTCACAGGCACTGTAAACGCAACGGGCGGTGTGATTGGGGATGTGACGGGTAACGTAACCGCTTCCAGCGGATCTTCTACATTCAACAATGTGGTGATCAATGGTAGCTTGGACATGGATGCTACAACAGCGTCCACCATTACGGGTCTGTCTACTCCCGTTAATCCTACTGATGCTTCGACGAAAGCCTATGTTGACCAACAAGTAGCACTCGTTTTATCCTCTGCACCGGCTGCATTAGATACACTCAATGAGTTAGCCGCAGCGATCAATGACGACGCTAACTTTGCTACAACGGTCAACAATAGCATTGCCACTAAGCTCTCTTTGAGCGGCGGCACGATGTCTGGTAATATTGATCTCAACAGCACCAACAAGATCACAAACATGCCGACGCCGTCAGCCAACTCTGACGGATCAAACAAAGGCTACGTTGATACGCAGAGAGACACTCGTCTAGCTACCACTGGCGGCACGATGTCTGGCGCTATCAATATGAACTCTCAGGCTATCACTAGCCTAGCCAATCCGGCTAACAGCGGTGACGCAGCCAACAAATTCTATGTGGATTCGATCTTAGGATCGGCTACTTCGGCTGCGGCCAGTGCCTCTACTGCATCTGCATTGGCGGCTCAAGCCAGTGGCTCTGCGGCTAACGCCCAAGCCTCAGAAGACGAAGCACAAGAGTGGGCCACAAAGACCACAGGCACCATCACAGGCGAGAGTGAATACTCGGCCAAGGAATATGCCATCGGTACGGTTATCCGAGGTAACATAGGTTCAGCTAAAGACTGGTCAACTTATACTGGAGGCACTGTAGACGGGACTAATTACTCGGCTAAATACTGGGCCACAAATGCTAACATTGGTACAATTGCCTCGAACATCGACGACTTGGTTAATGTAGCCAATGACCTTAGTTCAGGTAATTTCGTAGCCGGTCAAATATACGACTTTGGGTCAATCACAGACGCAGCGTCAGGCACCAGTGGTGCGCCAGATGGCTTCATTGTCACTGTGGCTAACAATCTAGCAGACGTACAGACTGTATCTAATGTTATAACGAATGTTAATACGGTGGCCGGAATAAGCGCCAATGTCACTACAGTGGCTGGGGTGAGTAGCGCAGTATCAACATTGGCGGCTATAAGCTCAGATGTATCGGCAGTAGCCCCTATTGCAGCAAATGTGACTACTGTGGCTGGTGTCTCGTCCGACGTTACGGCAGTGGCTAATAACAATGCGAACATCAACACTGTCGTAGGCCAAATAACACCTAACAATAACATTAGTACGTTGGCGTCTATTGCCGGAAATATTTCCACAGTTGCGTCAGTAAGTGTTGACGTTACTACTGTAGCTGGTATATCATCTAATGTAACCGCAGTGGCTAATAATAACGCCAATGTCACCTCAGTAGCAAACATCGATAGTGACGTAACCGCAGTGGCGGGTATCGCAAGTGATGTGACTACAGCGGCTACTAATGTCACCGATATCACAAACTTCGCTGATGTATACCAAGGCCCAAAGGCCACCGCACCCACACAGCGTAATAACAACAGTTCTCTAGTGGCGGGTGACCTCTACTTTGATACCGTCTCAGGATTCATGCGGTACTACAGCGGAAGTTCTTGGTCCAACATCACCGCCCCTACAGGGGACATGGGTAACCAGAACTCCACTAGCGTGGCGATCACCGGCGGCTCCATCACAGGTATCACAGACCTAGAGATTGCAGACGGTGGCACCGGAGCTTCTAGCGCACCAGCGGCCCGTACAAACCTCGGGCTAGATACTATGGCTACACAGGCCGCAAACAATGTCGCCATCACCGGCGGAACAATTTCAGTCGATTTCGACTTCGGGAGTATTTAA

Tertiary structure

PDB ID
fc24ef15c2f487cbf43d4a705f8d5c671f08a0a037c1a9e622f48de9aaed57c8
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2740
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diverse, abundant and novel viruses infecting the marine abundant Roseobacter RCA lineage Zhang,Z.F., Chen,F., Chu,X., Zhang,H., Luo,H.W., Zhai,Z.Q., Yang,M.Y. and Zhao,Y.L. 2019 — GenBank