Protein

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Genbank accession
CAB5207023.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
TF
Evidence Phold
Probability 1,00
Protein sequence
MPGLYSNSSSTYTVVPSDLTTLYGTTSSAVITATVQTTNVSGLYSGLYAPLPNNAQQLLAYLDNNGNVHFALDPATGNTTIIANYVGTSTVGDYTFAGNVITLDDGLDSILNVGSQTWQFNLDGSTQFPNYTFPSANGLNEQVLVNDGNGQLYWNTVTTFSTATVDVFSGDDVEIEFTLSQVPISINFTEVSVSGILQTPNINYLLVDDTIIFTGAPPSGSDNIQIRYYSILTAVRIPGPPGPTGPQGAVGPTGSNGSNGATGPTGANGSNGLTGATGPRGLQGEQGPKGDTGPTGAQGATGPSGGPIGPTGAAGPQGPQGPQGVNGSPGATGPTGAQGAIGPTGATGSTGAASTIPGPTGPAGLTGPTGPAGASSTATMTTTWALLYNKNNSSGPTNIALGQKAGLTNQSTSSSIAFGVEAGQLNQESYTVAIGFRAGNAYQEPQAIAIGQYAGLDSQSTSSIAIGTYAGYDQLGPLAIAIGERAGANNASKASVAIGTEAGSVDLGARGIAIGMEANANQKFTTQNGDFTIALGYGAGFYGQDDSAIAIGLRAGVSPGGTIRQPAGSIVISTTELQAPATNTFVVKPVRKITSATLPSGFLNMAYNPTTGEIIYWGP
Physico‐chemical
properties
protein length:619 AA
molecular weight: 61873,17220 Da
isoelectric point:4,17979
aromaticity:0,07108
hydropathy:-0,09160

Domains

Domains [InterPro]
IPR008160
238–291
IPR008160 IPR011049
IPR050149
238–373
IPR050149
CAB5207023.1
1 619
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB5207023.1 [NCBI]
Genbank nucleotide accession
LR798227 [NCBI]
CDS location
range 10202 -> 12061
strand +
CDS
ATGCCAGGTTTGTATTCTAACTCATCGTCTACCTATACAGTTGTTCCCAGTGATCTCACTACTCTGTATGGCACAACTAGCAGTGCTGTTATCACAGCCACAGTTCAAACTACCAATGTCAGTGGTTTATACAGTGGCTTGTATGCTCCTCTGCCTAATAATGCTCAACAACTACTTGCTTACCTAGACAACAATGGCAATGTTCACTTTGCCCTAGACCCTGCTACAGGCAATACCACAATTATTGCCAACTATGTGGGCACATCTACAGTGGGTGACTATACCTTTGCTGGCAATGTTATCACCTTAGATGATGGACTAGACAGCATTTTAAATGTTGGATCACAGACATGGCAATTTAACCTAGATGGTTCAACACAATTTCCCAACTATACATTCCCTAGTGCCAATGGCTTAAATGAACAAGTTTTGGTCAATGATGGCAATGGTCAACTATACTGGAATACAGTCACAACATTTTCTACTGCCACAGTAGATGTATTCAGTGGCGATGATGTTGAGATTGAATTTACATTAAGTCAAGTGCCCATCAGCATTAACTTCACTGAAGTTTCAGTTAGTGGTATTCTTCAAACACCAAATATTAATTATTTGTTAGTAGACGATACTATTATATTCACAGGTGCTCCTCCCAGCGGTAGTGATAATATTCAAATTCGCTACTACAGTATTTTAACTGCTGTGCGTATTCCAGGACCTCCAGGTCCCACTGGACCACAGGGTGCAGTTGGACCCACAGGTTCAAATGGCTCAAATGGAGCTACTGGACCCACTGGCGCAAATGGTTCAAATGGATTAACTGGAGCAACTGGTCCCAGAGGTCTTCAAGGCGAACAAGGTCCTAAAGGTGATACTGGACCTACTGGTGCACAGGGAGCAACTGGACCCAGTGGAGGACCTATTGGACCAACTGGTGCTGCTGGTCCACAAGGACCACAAGGACCACAAGGCGTTAATGGCAGTCCAGGTGCCACTGGTCCAACTGGTGCACAAGGCGCAATTGGACCAACTGGTGCCACAGGTTCAACTGGAGCAGCCAGTACAATTCCTGGACCAACTGGTCCCGCAGGATTAACTGGACCCACAGGTCCCGCTGGAGCATCTTCAACAGCAACAATGACTACCACTTGGGCATTGTTATATAATAAAAATAACAGCAGTGGTCCAACTAACATTGCTCTTGGACAAAAAGCTGGTTTAACTAATCAATCAACCTCAAGTAGCATTGCTTTTGGTGTTGAAGCTGGACAATTAAATCAAGAATCATACACAGTTGCCATTGGTTTTAGAGCAGGAAATGCCTACCAAGAGCCACAGGCTATTGCTATTGGACAATATGCTGGACTTGATTCGCAATCTACTTCTAGTATAGCGATTGGAACTTATGCTGGATATGACCAATTAGGTCCTCTAGCAATTGCCATTGGAGAGCGTGCTGGAGCAAACAATGCCAGTAAAGCCAGTGTTGCTATTGGCACAGAAGCAGGCAGTGTTGACCTAGGTGCTCGTGGTATTGCCATTGGCATGGAAGCCAACGCAAATCAAAAGTTCACTACACAAAATGGCGATTTCACTATTGCCCTAGGATATGGTGCTGGATTTTATGGACAAGATGATAGTGCCATAGCAATTGGACTTAGAGCAGGTGTTAGTCCAGGTGGTACGATTAGACAACCAGCAGGTTCTATTGTTATCAGTACAACTGAACTACAAGCACCAGCTACAAATACATTTGTTGTTAAACCAGTAAGAAAAATCACAAGTGCCACACTACCATCAGGATTCTTAAACATGGCTTATAATCCTACCACTGGCGAAATTATATATTGGGGACCATAA

Tertiary structure

PDB ID
4b12a453ea0a40c5fbc792e419e74ec9e897d9111d1cc8ed2cad123bdace44f3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6601
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50