Protein

View in Explore
Genbank accession
UMO77109.1 [GenBank]
Protein name
tailspike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSSGCGDVLSLADLQTAKKHQIFEAEVITGKSGGVAGGADIDYATNPNTGQVQKTMPAILRDIGFEPASFDFTSGGTLTPNDRNKAVLWPMADGGDGDWYYWEGTLPKVIPAASSPLTAGGIAEGAWRPVGDITLREELLESVLVMNGARFALRDIHSALDFAGVVADGVTDVTTALQAGIDSLPAGSALLFTGGTFLFDKVTISKPLTVTGDAEMVHNGFRIKTSNFTSTLLGKQQSRTYGSQSRCFEIRAYEDAADYENIKILFNDMAGFFYSTDFRGREYSAAPNDPANRVVKNTLIMGCTSTAPAGQAAGNYQHIGITNAKCIGNSAYNGVNASSYNFINGNGYLIVTGNYDDNNTYGSLEIENNLVSHATISGNTFKKQLWVDDTSNVSIVGNTVSDRIFLTAQSNDTDNITVSGNTCTRLSATTFGPIEEQIGRHKGIHVIGNTFYGEAGVNDIFADGHVDCITIESNALNGVDSNAIALVRSPTCNHMVRNNRSKVTRALAISGSGGRVVEYGNDNITLSGTSESHHISNLMQPSLDFLDLPGRYLHSTKYTGSIAPLGSASLSLPIPDSAGLAFRGVSLWVMIRDAVTNNISIYRIDGVYKAVGASIQLSFSTPYSAFGVDTASINVANNASTSNSINILVSNTHVTKILQVTVMPEVTSKLGTEE
Physico‐chemical
properties
protein length:674 AA
molecular weight: 71611,04140 Da
isoelectric point:5,12815
aromaticity:0,07864
hydropathy:-0,09792

Domains

Domains [InterPro]
G3DSA:2.10.10.80
66–141
G3DSA:2.10.10.80 IPR012334
IPR040775
94–132
IPR040775 IPR011050
UMO77109.1
1 674
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage fBC-Eco01
[NCBI] 		2914167 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UMO77109.1 [NCBI]
Genbank nucleotide accession
OM272052 [NCBI]
CDS location
range 23235 -> 25259
strand +
CDS
ATGTCAAGCGGATGCGGTGACGTTTTAAGCCTGGCGGATTTACAAACCGCCAAAAAACACCAGATTTTCGAGGCTGAGGTTATCACCGGTAAATCTGGTGGCGTTGCAGGTGGTGCAGATATCGACTATGCCACTAACCCGAACACCGGCCAAGTTCAAAAAACTATGCCAGCCATTCTGCGCGATATTGGGTTCGAACCAGCGTCTTTTGATTTTACATCTGGCGGTACTCTTACCCCGAACGACCGTAACAAGGCGGTTTTATGGCCTATGGCGGATGGTGGTGATGGCGACTGGTATTACTGGGAGGGCACGCTGCCGAAGGTCATACCAGCCGCGTCTTCACCGTTAACGGCTGGAGGTATTGCCGAGGGGGCATGGCGGCCTGTGGGGGATATCACGCTGCGCGAAGAGCTTCTTGAGTCTGTTTTGGTTATGAATGGTGCTCGATTTGCCCTTCGAGACATTCATTCTGCGCTTGATTTTGCGGGTGTAGTTGCTGATGGCGTGACTGATGTGACTACCGCACTGCAAGCGGGCATCGATTCCCTGCCCGCCGGTAGCGCTCTGCTGTTTACAGGCGGGACATTCCTGTTCGATAAGGTCACGATTAGCAAGCCACTCACTGTAACCGGCGACGCAGAGATGGTTCACAATGGGTTTCGAATTAAAACCAGTAACTTCACATCCACCCTGCTTGGCAAGCAGCAAAGTCGAACCTACGGCAGCCAATCACGTTGTTTTGAAATACGTGCGTATGAAGATGCTGCTGATTACGAAAACATCAAGATCCTGTTCAACGACATGGCGGGGTTCTTCTATTCGACTGATTTTCGCGGTCGTGAATATTCAGCCGCACCAAACGACCCCGCCAACAGAGTGGTAAAAAATACGCTGATTATGGGTTGCACCTCAACGGCCCCCGCCGGTCAGGCTGCTGGTAACTACCAGCACATAGGCATAACTAACGCCAAGTGCATAGGTAACTCAGCCTATAACGGAGTAAACGCCTCAAGCTACAACTTTATAAACGGCAACGGGTATCTGATAGTTACCGGGAATTATGACGACAACAACACCTACGGTTCGCTTGAGATAGAAAACAACCTAGTTTCTCATGCGACGATCTCAGGCAACACATTCAAAAAGCAGTTGTGGGTAGACGATACAAGCAACGTCTCCATCGTCGGAAATACCGTGTCAGACAGGATTTTCCTTACTGCGCAGAGTAATGATACCGATAACATTACTGTGTCGGGGAATACCTGCACGAGGCTGTCAGCCACCACATTTGGACCGATTGAGGAGCAAATAGGGAGGCATAAAGGGATTCATGTCATTGGTAATACGTTCTATGGTGAGGCGGGGGTTAATGATATCTTTGCCGATGGTCACGTTGATTGCATCACTATTGAATCCAATGCATTGAATGGGGTCGATAGTAACGCCATCGCATTGGTGCGCAGCCCAACATGTAACCACATGGTGCGTAATAACCGCAGTAAAGTGACTCGCGCCTTGGCAATCTCCGGGTCTGGTGGCCGGGTTGTTGAGTATGGCAACGACAATATAACCCTTTCTGGTACGTCCGAAAGTCATCACATCTCAAACCTCATGCAGCCAAGTTTAGATTTTCTTGACCTGCCTGGGCGTTACCTGCACAGCACTAAGTACACGGGGTCTATCGCGCCGCTCGGCTCTGCCTCCCTATCCCTGCCAATCCCAGATAGTGCTGGGCTGGCATTCAGGGGGGTGTCACTGTGGGTGATGATAAGGGATGCCGTGACCAATAATATATCTATCTACAGAATTGATGGTGTATACAAAGCCGTTGGGGCTTCGATACAGCTGTCTTTTAGTACGCCCTATTCGGCATTTGGTGTCGACACTGCATCGATTAATGTTGCTAATAACGCTAGCACATCGAATAGCATCAATATCCTTGTGTCTAACACTCATGTGACGAAAATATTACAGGTTACTGTTATGCCTGAAGTGACAAGCAAACTTGGGACTGAGGAGTAA

Tertiary structure

PDB ID
8fd6794334edccf3321b0e2cfee83456c13cdf451f57caa0ad84efd8ca3b62e4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8062
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and genome Characterization of a new bacteriophage of E. coli strain isolated from peritoneal puncture fluid Grami,E., Badawy,S., Kiljunen,S., Neila,S. and Skurnik,M. 2023-01-07 — GenBank