Protein

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Genbank accession
BBC14776.1 [GenBank]
Protein name
gp12 Short tail fibers
RBP type
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MSNNTYQHVSNESRYVKFDPTDTNFPPEITDVQAAIAAISPAGVNGVPDASSTTKGILFLATEQEVIDGTNNTKAVTPATLATRLSYPNATEAVYGLTRYSTDDEAIAGVNNESSITPAKFTVALNNVFETRVSTESSNGVIKISSLPQALAGADDTTAMTPLKTQQLAVKLIAQIAPSKNAATESEQGVIQLATVAQARQGTLREGYAISPYTFMNSTATEEYKGVIKLGTQSEVNSNNASVAVTGATLNGRGSTTSMRGVVKLTTTAGSQSGGDASSALAWNADVIHQRGGQTINGTLRINNTLTIASGGANITGTVNMTGGYIQGKRVVTQNEIDRTIPVGAIMMWAADSLPSDAWRFCHGGTVSASDCPLYASRIGTRYGGSSSNPGLPDMRGLFVRGSGRGSHLTNPNVNGNDQFGKPRLGVGCTGGYVGEVQKQQMSYHKHAGGFGEYDDSGAFGNTRRSNFVGTRKGLDWDNRSYFTNDGYEIDPASQRNSRYTLNRPELIGNETRPWNISLNYIIKVKE
Physico‐chemical
properties
protein length:527 AA
molecular weight: 55920,27060 Da
isoelectric point:7,02498
aromaticity:0,06831
hydropathy:-0,39715

Domains

Domains [InterPro]
IPR015173
246–326
IPR015173 IPR037053 IPR044916
G3DSA:2.10.280.10
246–286
G3DSA:2.10.280.10 G3DSA:2.160.30.10 SSF88874
SSF69349
246–326
SSF69349 IPR011083 IPR027448
BBC14776.1
1 527
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage T2
[NCBI] 		2060721 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BBC14776.1 [NCBI]
Genbank nucleotide accession
LC348380.1 [NCBI]
CDS location
range 86548 -> 88131
strand +
CDS
ATGAGTAATAATACATATCAACACGTTTCTAATGAATCTCGTTATGTAAAATTTGATCCTACCGATACGAATTTTCCACCAGAGATTACTGATGTTCAGGCTGCTATAGCAGCCATTTCTCCTGCTGGCGTAAATGGAGTTCCTGATGCATCGTCAACAACAAAGGGAATTTTATTTCTTGCCACTGAACAGGAAGTTATCGATGGAACTAATAATACCAAAGCAGTTACACCAGCAACGTTGGCAACAAGATTATCATATCCAAACGCAACTGAAGCTGTTTACGGATTAACAAGATATTCAACCGATGATGAAGCCATTGCCGGAGTTAATAATGAATCTTCTATAACTCCAGCTAAATTTACTGTTGCTCTTAATAATGTCTTTGAAACTCGTGTTTCAACTGAATCATCAAATGGGGTTATTAAAATTTCATCTTTACCGCAAGCATTGGCAGGTGCAGATGATACTACTGCAATGACTCCATTAAAAACACAACAATTAGCTGTTAAATTGATTGCGCAAATTGCTCCTTCTAAAAATGCTGCTACAGAATCTGAGCAAGGTGTAATTCAGTTAGCTACAGTAGCACAGGCTCGTCAGGGAACTTTAAGAGAAGGATACGCAATTTCTCCTTATACGTTTATGAATTCTACTGCTACTGAAGAATATAAAGGCGTAATTAAATTAGGAACGCAATCAGAAGTTAACTCGAATAATGCTTCTGTTGCGGTTACTGGAGCAACTCTTAATGGTCGTGGTTCTACGACGTCAATGAGAGGCGTAGTTAAATTAACTACAACCGCCGGTTCACAGAGTGGAGGCGATGCTTCATCAGCCTTAGCTTGGAATGCTGACGTTATCCACCAAAGAGGCGGTCAAACTATTAATGGAACACTTCGCATTAATAATACGCTTACAATAGCTTCAGGTGGGGCAAATATTACCGGAACAGTTAACATGACTGGCGGTTATATTCAAGGTAAACGCGTCGTAACACAAAATGAAATTGATAGAACTATTCCTGTCGGAGCTATTATGATGTGGGCCGCTGATAGTCTTCCTAGTGATGCTTGGCGTTTTTGCCACGGTGGAACTGTTTCAGCGTCAGATTGTCCATTATATGCTTCTAGAATTGGAACAAGATATGGCGGAAGCTCATCAAATCCTGGATTGCCTGACATGCGCGGTCTTTTTGTTCGTGGCTCTGGCCGTGGCTCTCATTTAACAAATCCAAATGTTAATGGTAATGACCAATTTGGTAAACCTAGATTAGGTGTAGGTTGTACTGGTGGATATGTTGGTGAAGTACAGAAACAACAGATGTCTTATCATAAACATGCTGGTGGATTTGGTGAGTATGATGATTCTGGGGCATTCGGTAATACTCGTAGATCAAATTTTGTTGGTACACGTAAAGGACTTGACTGGGATAACCGTTCATACTTCACTAATGACGGGTATGAAATTGACCCAGCATCACAACGAAATTCCAGATATACATTAAATCGTCCTGAATTAATTGGAAATGAAACACGTCCATGGAACATTTCTTTAAACTACATAATTAAGGTAAAAGAATGA

Tertiary structure

PDB ID
45dd7e830e6e4b50eae46f6cb46c74e97642d80988348cbd2e4406e53b79b110
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6893
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome analysis of Escherichia phage PP01 and T2 Hoshiga,F., Yoshizaki,K., Miyanaga,K. and Tanji,Y. 2019-02-01 — GenBank