Protein

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Genbank accession
CAB4182234.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,88
TF
Evidence Phold
Probability 1,00
Protein sequence
MAIKIRLPYNTSTGVTPTATNLITGEMAVNTADAKLWVKHSDGTLKLITSAGLQGYQGGGVVGVAGSQGSVGFVGAAGFIGVTGPQGLQGFQGLQGLTGTTGPQGLQGFVGPQGSVGGLGIIGGYQGPQGATGAVGFSGFTGPQSQAAGPQGPRGAPGAYGPPGPTGPIGALTTGPQGFPGPNGLCVPAPSPSTGGDGGVG
Physico‐chemical
properties
protein length:201 AA
molecular weight: 18983,01240 Da
isoelectric point:8,88956
aromaticity:0,05970
hydropathy:0,03930

Domains

Domains [InterPro]
IPR050149
52–185
IPR050149
IPR008160
62–116
IPR008160
CAB4182234.1
1 201
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4182234.1 [NCBI]
Genbank nucleotide accession
LR797022 [NCBI]
CDS location
range 140207 -> 140812
strand -
CDS
ATGGCAATTAAGATTAGACTACCATATAATACTTCTACGGGTGTCACACCTACTGCAACTAATCTCATAACTGGAGAGATGGCAGTAAACACAGCCGATGCTAAGCTTTGGGTAAAGCATAGTGATGGGACACTAAAACTAATTACATCAGCCGGTTTACAAGGTTATCAGGGTGGTGGAGTTGTAGGTGTTGCAGGATCACAGGGAAGTGTTGGGTTTGTTGGTGCAGCTGGATTTATTGGTGTTACTGGTCCTCAAGGATTACAGGGGTTTCAGGGTCTACAGGGTTTAACTGGTACTACGGGTCCACAAGGTTTACAGGGATTCGTAGGACCGCAGGGATCCGTAGGAGGATTGGGCATCATCGGAGGCTACCAAGGTCCACAGGGAGCCACCGGAGCGGTAGGATTTTCTGGTTTCACCGGCCCACAAAGTCAAGCTGCAGGACCACAAGGTCCACGCGGTGCTCCCGGCGCATATGGCCCGCCTGGCCCGACGGGACCCATAGGAGCTTTGACAACCGGTCCACAAGGATTTCCAGGTCCCAACGGCCTTTGTGTTCCCGCGCCGTCGCCTTCCACCGGTGGTGACGGCGGCGTCGGTTGA

Tertiary structure

PDB ID
d858807d75004ccb41b0a5d06deb82a5e9e81ccd9fbaf7f91a9419a7d67ab88e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6745
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50