Protein

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Genbank accession
BAS69558.1 [GenBank]
Protein name
putative tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAFDGAIKSLMQGVSQQVPRERLDGQVSVQLNRLSDVVNGNRRRPGARYLSTLPILANFNDRVFATYVDVADATNHVLVNTEDGQLLVLSEDFGTVLHTGMYPYLIASTANAIQTGTLRGALYLANTEQRPTLVHGPTVQQDPAKTGFFFVRVPAFSKDYDITLSNSTGTYTYTHRTPNGQGGGDADLAKPSYVVEKLVDLINDETATHGITAHAFDAYMYLVSDTATLAVTTNAGTTYATASNTARVSLLSDLPARLPTIADGILCAVGTTPRSFTWYEFESETSIWKEAGAYGSPTGFAGMPIKLTLDGSYTVSTPEYEGRLAGSDTTNEDPGFIEHGLTGFGAYQGRLVILAGPEVCMSASGTPERWYRSTVTTLLTEDPINVFSGAATTTNFSHCVQFNKDLLLFSRSCQAVVPSSNAAITPQTAQIVITSQYTTDTLAAPTVVGRSVLYPMPRTEAFAGILEMIPSNTTDSQYTSNDVTAHIPRYMPGSIRSITASTTSNSSVLLCTGDDRSVFIQDYLWSGDEKVQSAWHQWSVPYPIVCAWFVRDRVYLGMRDGNTIVVGTVEPQAGATYLSYTRPFSDLYSLVTVTDGVTTFPVQLRNAYLSGVEPFLTFADTSKGGMWVGIESIDTTTWEVRTVRNVPSGQYFLGLRYMSVLSPTPPLVRDANGVVIGTSRTLLVRYELTVKDSGEFHAAISDSSRVLADGTYSSLVYSNVELLPNEPTSASLGRVVVPVRAQAQETVATFESDADTDLCILDIEYILQYRARRKRL
Physico‐chemical
properties
protein length:776 AA
molecular weight: 84366,68330 Da
isoelectric point:5,01419
aromaticity:0,09407
hydropathy:-0,08003

Domains

Domains [InterPro]
IPR058003
5–775
IPR058003
BAS69558.1
1 776
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage PPWS1
[NCBI] 		1685500 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BAS69558.1 [NCBI]
Genbank nucleotide accession
LC063634 [NCBI]
CDS location
range 27918 -> 30248
strand +
CDS
ATGGCGTTCGATGGCGCGATTAAGAGCTTAATGCAGGGCGTGTCTCAGCAGGTTCCGCGTGAACGACTGGACGGGCAAGTATCTGTACAGCTCAACCGTTTATCCGATGTGGTGAACGGCAACAGACGTAGACCGGGCGCTCGTTACTTGAGCACCCTACCTATTCTGGCAAACTTCAATGACCGTGTATTCGCTACATACGTGGATGTGGCTGACGCTACTAATCACGTTCTGGTGAACACCGAAGACGGACAGTTACTGGTTCTCTCAGAGGACTTCGGTACTGTACTGCACACGGGTATGTATCCGTACCTAATCGCTAGCACAGCTAACGCTATCCAGACAGGCACCCTACGTGGTGCCTTGTACCTAGCGAACACTGAGCAGCGCCCTACGCTGGTACATGGTCCGACCGTACAGCAAGACCCTGCTAAGACAGGTTTCTTTTTCGTTCGAGTCCCTGCATTCAGTAAGGACTACGACATCACTTTATCGAACTCCACAGGTACGTACACGTACACTCACCGCACCCCTAACGGGCAAGGTGGTGGTGATGCTGACTTAGCAAAACCGTCGTACGTAGTGGAGAAGTTAGTAGACCTTATTAACGACGAGACAGCAACCCACGGTATCACTGCACACGCATTCGATGCGTACATGTACCTTGTGAGCGACACAGCAACATTGGCTGTCACGACTAACGCAGGGACGACGTACGCCACTGCCAGCAATACGGCGCGTGTCTCATTGCTGTCCGACCTACCTGCTCGACTTCCTACCATTGCTGACGGTATACTATGTGCTGTTGGGACTACGCCACGTTCCTTTACGTGGTATGAGTTCGAATCTGAAACCTCTATCTGGAAGGAGGCAGGGGCGTACGGTAGTCCTACAGGTTTCGCGGGTATGCCCATCAAGTTAACGCTGGATGGTTCCTACACTGTGAGCACACCGGAGTACGAGGGTCGATTAGCAGGTTCCGATACAACGAATGAAGACCCCGGCTTTATCGAACATGGGCTGACAGGCTTCGGCGCTTATCAAGGCCGCTTGGTTATCTTGGCTGGACCAGAGGTATGTATGAGCGCATCGGGTACACCTGAGCGCTGGTACAGGAGTACAGTGACGACACTGCTTACAGAAGACCCTATCAACGTGTTCTCTGGTGCTGCGACTACCACTAACTTTAGCCACTGCGTACAGTTCAACAAAGACTTGCTGTTGTTCTCCCGTTCGTGTCAGGCTGTTGTGCCTAGTAGCAACGCTGCTATCACACCACAGACTGCACAGATTGTTATTACGTCACAGTACACGACGGACACACTTGCAGCGCCTACAGTAGTAGGGCGCTCTGTGCTGTACCCTATGCCGCGTACTGAAGCCTTCGCTGGTATTCTGGAGATGATTCCGAGTAACACGACTGATTCCCAGTACACGTCAAACGATGTGACTGCACATATCCCAAGGTACATGCCCGGAAGTATTCGAAGCATCACCGCTAGCACTACGTCAAACTCCAGTGTGTTACTCTGCACAGGGGATGACCGTTCCGTGTTCATCCAAGACTACTTGTGGTCTGGTGATGAAAAGGTACAGTCTGCGTGGCACCAGTGGAGTGTACCTTATCCTATTGTGTGTGCATGGTTCGTACGGGACCGCGTGTACTTGGGTATGCGTGATGGTAACACCATTGTGGTGGGCACAGTCGAACCGCAGGCAGGTGCCACGTACTTATCGTACACTCGCCCGTTCTCTGACTTGTACTCGCTGGTGACCGTGACAGATGGTGTAACAACGTTTCCTGTCCAATTGCGCAATGCGTACTTATCCGGTGTTGAACCCTTCCTGACCTTTGCTGACACCAGTAAAGGTGGTATGTGGGTTGGTATCGAATCCATCGACACCACTACATGGGAGGTCCGTACAGTGCGTAACGTCCCTAGTGGGCAGTACTTCCTTGGGTTACGGTATATGAGTGTACTGTCACCTACGCCGCCGCTGGTACGTGATGCCAACGGTGTCGTTATCGGTACGAGTAGGACGTTGCTAGTCCGGTACGAGTTGACTGTTAAAGACTCAGGTGAGTTCCACGCCGCTATCTCAGATAGTTCCCGTGTTCTCGCCGATGGTACGTACTCCAGTTTGGTTTATTCCAACGTGGAGCTACTGCCTAATGAACCTACAAGTGCGTCATTAGGTCGTGTTGTAGTACCTGTACGAGCACAGGCACAGGAGACTGTGGCTACGTTCGAATCGGATGCCGACACCGACCTATGCATCCTAGACATTGAGTACATCCTACAGTACAGAGCAAGGAGGAAAAGACTATGA

Tertiary structure

PDB ID
e7fc72055e54e11a1d363787bebedb292f7f94e4e523bbb2991a6d34ff29d9e8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8697
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Sequence of Pectobacterium carotovorum Phage PPWS1, Isolated from Japanese Horseradish [Eutrema japonicum (Miq.) Koidz] Showing Soft-Rot Symptoms Hirata,H., Kashihara,M., Horiike,T., Suzuki,T., Dohra,H., Netsu,O. and Tsuyumu,S. 2016 27103734 GenBank