Protein

View in Explore
Genbank accession
YP_009855969.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,50
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MADLKQIQFKRSKTAGARPTTAQIAEGELAINLKDRTFFTSDGTQIIDLGLAKGGQIDGNITQTGNYTQTGNFSTSGDISARNLNATTGVTAGAEVVSNIGAFRAKATSSSNAHLRFQGEEVAASKIYERGILYADPQTASYGQIALRVQNGSAADSANAVFFWNGRGDFTAPRDVYAQRSRLSIESIAPTMNTNRLFTAYKPFGAQQYSWDDSVTYTKATGALNYVYKGRANIEGTIWHNIIDERTGAENVWYTGSGPENKMHSLASRGGKGHGSYTGSLMIGANNLGEYSGMGDSSIALGDNDTGFKWTGDGAFSIMSNAQKIVDIYNSATKPFYIKKCTKIAHSDNNSDNLFPSNNNALLEIDTSLDGNNAGGNGVTLIGYNSGSRYYHYFRGRGSANFDMDNGVYISKGGLSVTGNISSTGQVQPSNFSNFDSRYQNLLQLGGNVNLDTLAGADHAGEYAQHSNVNTSLALNYPEALAGHLTVTSGAGVQQRYHVYNSTRVYLRAKYSSDSWRPWDRVVTEDYLKTGIPAQFVSKNSDGFRIAYGSYGFFIRNDGGSTYFMLTNSGDQMGTWNNLRPLIINNSTGQVTIATPLIVSHSSGLTVNSTAGDAISWGNAGACLANDGNLKGSRWKSFGGSDWAGDALSWVHGQNVSKSGDTMTGALRVTNWISADNVRTYNDIELSKNARRHIRFQDSRGADAYIYKDAGANPLRINLGADGGDWQFQVGGTFYASGNGDFNDVRIRSDIRLKTNLVKIESATDKIEKLNGYVYDKKQSLHDSEYNSQEAGLIAQELEKVLPEAVSELSDGTKTISSSATIALLVESIKELNSRIKELESK
Physico‐chemical
properties
protein length:842 AA
molecular weight: 90996,09880 Da
isoelectric point:6,55981
aromaticity:0,09620
hydropathy:-0,46805

Domains

Domains [InterPro]
cd19958
444–522
cd19958 IPR048390 IPR030392 Coil
IPR030392
749–842
IPR030392
YP_009855969.1
1 842
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage vB_EclM_CIP9
[NCBI] 		2696340 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009855969.1 [NCBI]
Genbank nucleotide accession
NC_048849 [NCBI]
CDS location
range 50163 -> 52691
strand +
CDS
ATGGCAGATTTAAAACAAATACAATTTAAGCGTTCTAAAACAGCAGGCGCCAGACCAACAACAGCTCAAATTGCTGAAGGCGAACTTGCTATTAACCTTAAAGATCGCACATTTTTTACTAGCGATGGTACTCAAATTATAGATCTTGGTCTTGCTAAAGGCGGCCAGATTGATGGTAATATTACTCAGACCGGTAATTACACCCAGACTGGTAATTTCAGTACTTCTGGGGATATTTCAGCTCGTAATTTAAACGCCACTACCGGTGTTACTGCTGGTGCTGAAGTTGTTTCAAATATAGGTGCATTTAGAGCAAAAGCTACTAGCTCTTCAAATGCTCATTTACGCTTCCAAGGCGAAGAAGTTGCAGCTTCTAAAATCTATGAACGCGGTATTTTATACGCAGATCCACAAACTGCTTCTTACGGGCAAATTGCATTACGTGTTCAAAATGGCTCTGCCGCTGATAGTGCGAACGCAGTATTTTTCTGGAATGGGCGGGGTGATTTCACTGCACCAAGAGATGTATATGCACAACGTTCTCGTCTGAGCATCGAATCTATTGCTCCTACTATGAACACTAATCGCCTTTTTACTGCATATAAGCCTTTTGGTGCACAGCAATATAGTTGGGACGACTCAGTAACTTACACAAAGGCCACAGGTGCTTTAAACTATGTGTATAAAGGTCGCGCAAATATAGAAGGGACTATTTGGCATAACATTATTGATGAAAGAACCGGTGCAGAGAATGTTTGGTACACGGGTTCTGGTCCTGAAAATAAAATGCATTCTTTAGCGAGTCGCGGCGGCAAAGGACACGGTTCTTATACCGGCTCTTTAATGATCGGTGCTAATAATCTCGGAGAATACTCTGGAATGGGGGATTCTTCTATAGCCCTTGGTGATAACGATACTGGATTTAAATGGACCGGTGATGGTGCTTTTAGTATTATGTCAAATGCCCAGAAAATAGTTGACATATATAACTCTGCCACAAAACCGTTTTATATTAAAAAATGTACTAAAATAGCACATAGTGATAATAATTCAGATAATTTGTTCCCATCAAATAATAATGCTTTATTAGAAATTGACACTTCATTAGACGGAAATAATGCTGGTGGTAATGGCGTAACTCTTATTGGGTACAACTCTGGAAGTAGGTATTATCATTATTTCCGCGGCCGCGGAAGTGCAAATTTTGATATGGATAATGGTGTATACATAAGTAAAGGCGGATTGTCAGTTACTGGCAATATATCATCTACTGGTCAGGTTCAGCCTTCTAACTTTAGTAACTTTGATTCTCGCTATCAGAATTTGCTACAACTTGGTGGCAATGTTAACTTAGATACGTTAGCTGGGGCTGACCATGCCGGTGAATATGCCCAGCACTCTAATGTAAACACATCTTTAGCTTTGAACTATCCTGAAGCACTCGCAGGTCATTTAACAGTTACTTCTGGTGCGGGTGTTCAACAAAGATACCATGTTTATAACAGCACCCGTGTGTATTTACGTGCGAAATATAGTTCTGACTCATGGCGCCCATGGGACCGGGTAGTAACAGAAGATTATTTAAAAACTGGAATTCCTGCGCAGTTTGTATCTAAAAACTCTGATGGTTTCCGTATTGCATATGGTAGCTACGGGTTCTTTATCCGTAACGATGGTGGCAGTACTTATTTCATGTTGACCAACTCTGGCGACCAAATGGGTACTTGGAACAATCTTCGCCCGTTAATTATAAACAACTCGACAGGCCAAGTTACTATTGCTACTCCATTAATTGTATCTCATTCTTCTGGACTTACAGTAAATAGCACGGCGGGTGATGCTATTTCATGGGGTAATGCAGGTGCTTGTTTAGCAAACGATGGTAACTTAAAAGGTTCACGCTGGAAATCTTTTGGCGGTTCTGATTGGGCGGGTGATGCTTTAAGCTGGGTTCACGGTCAAAACGTTTCTAAGTCTGGCGATACTATGACCGGCGCATTAAGAGTTACTAACTGGATTAGTGCCGATAACGTTAGGACTTATAATGATATAGAATTAAGTAAAAACGCTCGTCGACATATAAGATTTCAGGATTCTAGGGGTGCAGATGCATATATCTATAAAGATGCTGGAGCGAATCCGCTTAGAATTAATTTAGGTGCCGATGGTGGAGATTGGCAATTCCAGGTAGGTGGGACTTTTTACGCTAGCGGTAATGGTGATTTCAACGATGTTAGAATTCGTTCTGATATAAGATTGAAAACTAATTTAGTTAAAATAGAAAGTGCTACTGATAAAATAGAAAAGCTAAATGGCTACGTCTATGATAAAAAACAATCTTTACATGATTCAGAGTACAACTCTCAAGAAGCCGGATTGATTGCGCAAGAATTAGAAAAAGTACTTCCTGAAGCGGTTTCAGAACTTTCTGACGGAACTAAAACTATTTCTAGTTCTGCAACCATAGCGCTTTTAGTAGAAAGTATTAAAGAGCTTAATTCTAGAATTAAAGAACTTGAATCTAAATAA

Tertiary structure

PDB ID
b87bdc6c453d5d323b32983b7a797e0f7f9281adcb8be3d324f62fbe649f7158
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6088
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of the Enterobacter Phage vB_EclM_CIP9 Wang,K., Tamayo,M.G., Penner,T.V., Cook,B.W.M., Court,D.A. and Theriault,S.S. 2020 — GenBank