Protein

View in Explore
Genbank accession
XPK40952.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MANVIKTVLTYQLDGSKRDFNIPFEYLARKFVVVTLIGVDRKVLTINTDYRFATRTTISLTKAWGPADGYTTIELRRVTSTTDRLVDFTDGSILRAYDLNVAQIQTMHVAEEARDLTADTIGVNNDGHLDARGRKIVNLAFATGDYDAVPLKQIKERENSAWNAVIKSDEHANRSNREANRSHDEADRAKREADRSTQQAGASTAQAVESKTQADRSNSEANRAKGYADSMTASVAEAKKQADRSNSEANRARDEANRAAGEVTKAAAEVAKAAAHVETANGHADRANTEANRSKSEADRATNEANKLGSMNALAGAVRGVSPDHSVEWASNAAFNGEISNKRSITLMSPATTNSMGQMVHEYDGTDGQYVSNTYWAIKHPHRGDWHIPYKVINIPNDSTAWEMHFGDLMRCFNGLRVEAYNKPLGVHNGANTGVNTITYGPGDLGQGVWVCNTRWSFYDAGLEIGWVRGGSTNGNGLIRWKPESSQSTYHDIWLNPNGEVQFPAAIKAGGATVAVDGNIGGSIWGGHLYGWLRENTVNHISMGGVNLSQLWRAGGVSDGGGKVITGIINSNGDELVDVCQWRVMQYVRNNGQRFNIY
Physico‐chemical
properties
protein length:598 AA
molecular weight: 65299,39190 Da
isoelectric point:6,61540
aromaticity:0,07525
hydropathy:-0,56137

Domains

Domains [InterPro]
IPR005604
1–131
IPR005604 Coil Coil Coil G3DSA:6.20.70.20
XPK40952.1
1 598
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EmilieLinder_Bas103
[NCBI] 		3398411 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPK40952.1 [NCBI]
Genbank nucleotide accession
PQ850602.1 [NCBI]
CDS location
range 37785 -> 39581
strand +
CDS
ATGGCTAACGTAATTAAAACCGTTTTGACTTACCAGTTAGATGGCTCCAAGCGTGATTTTAATATCCCGTTTGAGTATCTAGCCCGTAAGTTCGTAGTGGTAACTCTTATTGGCGTAGACCGAAAGGTACTTACGATTAATACAGACTACCGTTTTGCTACGCGTACTACCATATCACTGACCAAGGCTTGGGGTCCAGCCGATGGCTACACGACCATCGAGTTACGTCGAGTAACCTCCACGACCGACAGATTGGTTGACTTTACGGATGGTTCAATCCTCCGTGCGTATGACCTCAACGTTGCTCAGATTCAAACAATGCATGTAGCAGAAGAGGCCCGTGACCTTACTGCTGATACCATCGGTGTCAATAATGATGGTCACTTGGATGCCCGTGGTCGTAAGATTGTGAACCTAGCGTTCGCTACTGGCGACTATGATGCTGTTCCTCTGAAGCAGATTAAGGAACGTGAGAACTCTGCGTGGAACGCTGTTATTAAATCTGACGAACACGCTAACCGCTCCAACAGGGAAGCCAACCGCTCACACGACGAAGCTGACCGCGCGAAACGTGAAGCTGACCGCTCAACCCAACAGGCAGGTGCCTCTACGGCACAGGCAGTTGAGTCCAAAACGCAAGCTGACCGTTCCAACTCTGAGGCCAACCGTGCTAAAGGTTATGCCGATAGTATGACCGCAAGTGTCGCTGAGGCCAAGAAGCAAGCTGACCGTTCCAACTCTGAGGCCAATCGTGCCCGTGATGAGGCAAATCGTGCTGCCGGAGAAGTGACTAAGGCTGCTGCTGAGGTTGCTAAAGCTGCTGCACATGTTGAGACAGCTAATGGACATGCTGACCGTGCTAACACTGAGGCAAACCGCTCTAAGAGTGAAGCTGACCGAGCCACTAACGAGGCCAACAAGCTAGGTAGTATGAATGCACTTGCAGGGGCGGTTAGGGGAGTAAGTCCAGACCACTCCGTAGAGTGGGCATCTAATGCCGCGTTTAATGGCGAAATTTCTAATAAGCGATCTATAACCTTAATGTCACCTGCTACTACTAACTCTATGGGTCAGATGGTTCATGAGTATGATGGTACTGACGGGCAATACGTATCAAATACATATTGGGCCATTAAGCACCCACACAGAGGGGATTGGCACATTCCGTATAAGGTTATAAACATACCTAACGACTCTACAGCATGGGAGATGCACTTCGGGGACTTAATGCGTTGTTTTAATGGATTGAGGGTCGAAGCATATAATAAACCACTAGGTGTTCACAATGGGGCTAATACAGGAGTGAATACCATCACGTATGGACCGGGTGATTTAGGCCAAGGTGTGTGGGTATGCAACACCAGATGGAGTTTCTACGACGCAGGGTTAGAAATTGGATGGGTTCGCGGCGGCTCTACTAATGGTAACGGCCTAATCAGGTGGAAACCAGAATCATCGCAATCCACGTATCACGATATTTGGCTAAACCCCAATGGCGAGGTGCAATTCCCAGCTGCGATTAAGGCAGGTGGTGCCACGGTCGCCGTTGATGGTAACATTGGCGGCTCTATCTGGGGTGGTCATCTATACGGATGGCTTAGAGAAAACACAGTCAACCACATTTCGATGGGTGGTGTTAACTTGTCGCAGCTATGGAGGGCTGGAGGTGTTTCTGATGGCGGTGGTAAGGTGATAACTGGTATTATAAACTCGAACGGCGATGAGCTGGTTGATGTATGCCAATGGCGAGTAATGCAATACGTCCGTAATAATGGACAACGTTTCAATATTTACTGA

Tertiary structure

PDB ID
f5eada593e2a64c81a38af9a646afaa96a29dc3624cb81711ff0add7654972f2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6342
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of Escherichia coli phages Huey, Dewey, and Louie Maffei,E., Willi,L. and Harms,A. — — GenBank