Protein

View in Explore
Genbank accession
YP_009986899.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,86
Protein sequence
MAKPIYYPDWATQTVTLPGTLNTNKIRPKETIRTVGMDYGQIMTCEEMNWILNNIGLWIRYLVDDFIPTLPDTYLPLVGTKITMAGDATGEATWNGNKEVILSIQVQDNSHNHLSANITDATSSIVKPNVLVKRDAGGAIYGGDIYVNGTSTTDPATLFFKNFAGQTNGEISAEYQTGGQLYIYRRNPSTGGVAAGVRLYDAGYVLIDNPRSNSGQDTSNGNALVRLDYLNSRLSSLQNTLQTNINSVQNNLNNVNSNLNSRIDNLQNSLQSQINSLQSQVNARVTAVRINGRIQLGVSESPYYAGHVMTGWAFGDKKELRGASYWSGPLQYYVNGRWVTVSY
Physico‐chemical
properties
protein length:343 AA
molecular weight: 37755,69230 Da
isoelectric point:6,83503
aromaticity:0,09038
hydropathy:-0,36647

Domains

Domains [InterPro]
G3DSA:1.20.5.340
175–294
G3DSA:1.20.5.340
Coil
238–276
Coil
YP_009986899.1
1 343
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage ukendt
[NCBI] 		2696458 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009986899.1 [NCBI]
Genbank nucleotide accession
NC_052661 [NCBI]
CDS location
range 126171 -> 127202
strand +
CDS
ATGGCGAAGCCAATATATTATCCTGACTGGGCTACACAAACTGTAACGCTCCCAGGAACTTTAAACACAAACAAAATTAGACCTAAAGAAACTATCCGCACAGTCGGTATGGACTATGGTCAGATCATGACTTGCGAAGAAATGAACTGGATTCTTAATAATATCGGTTTGTGGATTCGTTATTTGGTTGATGATTTTATTCCTACTTTGCCTGATACTTACTTGCCTTTAGTGGGAACTAAGATTACAATGGCTGGTGATGCTACTGGTGAGGCTACTTGGAATGGTAATAAAGAAGTTATTTTATCTATACAAGTTCAAGATAACAGCCATAATCACTTATCGGCAAACATTACAGACGCTACTAGTTCAATAGTAAAACCAAATGTATTGGTAAAACGTGATGCAGGTGGTGCTATTTACGGTGGTGATATTTATGTTAATGGCACTTCCACAACAGATCCTGCAACCCTGTTCTTCAAAAACTTTGCAGGACAAACAAATGGTGAGATTTCTGCCGAGTATCAAACCGGAGGCCAGCTTTACATCTATCGTAGAAATCCTAGCACAGGTGGCGTTGCGGCTGGCGTTCGTTTATATGATGCTGGTTATGTTCTAATTGACAATCCAAGATCGAATAGTGGACAAGATACTTCAAACGGAAACGCTTTGGTCCGCTTAGATTATTTGAACTCTCGTTTAAGCTCTCTTCAAAATACATTACAAACAAACATTAACAGTGTTCAAAATAATTTGAATAATGTTAATAGCAATTTAAATTCTCGTATTGATAATTTGCAAAACAGCTTACAAAGTCAGATAAACTCGCTTCAAAGTCAAGTGAATGCACGTGTAACGGCAGTTCGTATTAATGGACGTATTCAGTTAGGTGTATCAGAATCCCCTTACTATGCTGGTCACGTTATGACTGGTTGGGCTTTCGGTGATAAGAAAGAACTTCGTGGTGCTTCTTATTGGTCTGGTCCATTGCAGTACTATGTAAATGGTAGATGGGTAACAGTAAGCTACTAA

Tertiary structure

PDB ID
027986d61157fabc6bfa3574efade76009e588a7ce859202bdaf52613578fa33
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7224
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment Olsen,N.S., Forero-Junco,L., Kot,W. and Hansen,L.H. 2020 — GenBank