Protein

View in Explore
Genbank accession
QVJ12535.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,77
Protein sequence
MITPELIPSPFAAQGDKDPIPQTSSTGFANLRDGYTPDYEISLASNNPQAKAVERKIQNQLFFIATQNAQAWQRQMAPPWFQGMPGGYEQNAEVVRVGNDGIMRRYRSMVNANASDPLSSTTWEEQPAWSVMRSNIPMPAGGPGLSSGGEVITTGRNFNDLLNGTWEFFSDSVVVASQNAPVYPASAGAAAGMLEAKSWISGSNTFCVQRYTDRVGNVAVRGLNAGAWTNWMYAVNVMALQQGRVTYGVAAGSANAYTLTLVPQLQGGLVDGMILRVKFNTVNTGASTINVSGFGAKAIVGAANFPLTGGELGQGLIAELVFDATGDRWRILAGAPRIQVGNADQDYQAPSWKQVKDYVASQKLTEVDWADVVNKPNVAIQDTTPWFANLELSDARPFIDFHFNNNRAKDFDYRFISEADGSMAFYSRQGSAGPTQDILFSRSNVTFLQPRLDVAKNLAYIANSGSLWQNTTADQPGWKFTFAQGVDANNNAVIAVNTTNPDGSYRSQVMRWDWASTNVIFNNRPLFAGQYVPWDSGNFDPATKLTVGTTNNISGPTGIRNTTSNTGNMNTWGSSSTTASYGNAALQIFGRGGGEPAAIYFDNSQTGWYLGMDKDGQLKRAGWSLGNNSYVVTDESNIRNHVNGMSGAPVWGGQWFWGEWNFNPNTKLTIKAGTQETSSTAIFSGTLPFAPIASLSDYSQAPLTIYNSPTGPSAKPAVIAFIRPGNWGAFFGIDTDNKLKWGGGSLGNNSREIADSSNIMNLWASNPTAPSWNGQTVWRSGNFDPATKVDLNAANATNGNMIFNRISGTGSGIASSGRVGAINLQNGAHSGQAAAVTFERGGSIFVNFGLDTDNVLKVGGGNLGANAYPVIHAGNYNNYINQALVQVGLGGVGSYGIFAVLDNAAPIATVQPGVVVDGSILIYSSCAANYNSGQKPAGTWRCMGYVVNRDANTPDSATLFQRVT
Physico‐chemical
properties
protein length:964 AA
molecular weight: 103053,16830 Da
isoelectric point:5,66153
aromaticity:0,10581
hydropathy:-0,25861

Domains

Domains [InterPro]
cd19958
152–231
cd19958
QVJ12535.1
1 964
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PSA07_PB1
[NCBI] 		2833428 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVJ12535.1 [NCBI]
Genbank nucleotide accession
MZ089729.1 [NCBI]
CDS location
range 16453 -> 19347
strand -
CDS
GTGATCACACCCGAACTGATACCCAGTCCGTTTGCTGCGCAGGGCGACAAAGACCCGATCCCGCAGACCTCTTCCACTGGCTTTGCCAACCTTCGCGACGGCTACACGCCGGACTACGAAATCAGTCTGGCGTCGAACAACCCGCAGGCCAAAGCGGTCGAGCGGAAAATTCAAAACCAACTCTTCTTCATCGCGACCCAGAACGCACAGGCTTGGCAGCGGCAAATGGCGCCGCCGTGGTTTCAGGGCATGCCTGGCGGCTACGAACAGAATGCAGAAGTCGTGCGAGTCGGCAATGACGGCATAATGCGGCGTTATCGTTCCATGGTGAATGCCAATGCGAGCGACCCTCTCAGCAGCACGACTTGGGAAGAACAACCCGCATGGTCGGTGATGCGCTCCAACATACCGATGCCAGCTGGAGGCCCAGGCCTATCTTCTGGCGGAGAAGTCATCACGACCGGCCGCAACTTCAATGACCTGTTGAATGGGACGTGGGAGTTCTTCTCTGATTCAGTGGTCGTCGCTTCTCAGAACGCCCCCGTATATCCCGCTTCGGCTGGTGCAGCAGCTGGAATGTTGGAGGCGAAATCCTGGATATCCGGGTCCAATACATTCTGCGTTCAACGCTACACTGACCGCGTCGGGAACGTCGCTGTGCGCGGGCTTAATGCCGGGGCCTGGACCAACTGGATGTACGCAGTAAATGTCATGGCCCTCCAACAAGGCCGTGTGACCTATGGGGTCGCGGCTGGCTCGGCGAACGCTTACACGTTGACGCTCGTTCCGCAGCTCCAAGGCGGCCTGGTGGACGGCATGATCCTTCGGGTCAAGTTCAACACCGTTAACACCGGCGCCTCCACCATCAACGTCTCCGGATTTGGCGCCAAGGCCATCGTCGGCGCGGCAAACTTCCCGTTGACTGGTGGAGAACTCGGTCAAGGACTCATTGCTGAGCTTGTATTCGACGCCACCGGCGACCGTTGGAGGATTCTCGCAGGCGCGCCGCGCATCCAAGTAGGCAACGCCGATCAAGATTATCAGGCTCCCAGCTGGAAACAGGTTAAGGACTATGTCGCGTCCCAAAAGTTGACTGAAGTGGACTGGGCTGACGTCGTCAACAAGCCGAACGTCGCCATCCAAGACACCACACCGTGGTTCGCCAATCTGGAGTTGTCTGACGCTCGTCCTTTCATCGATTTCCACTTCAACAACAACCGCGCCAAAGACTTCGACTATCGCTTTATCTCTGAAGCTGATGGGTCGATGGCGTTCTATTCTCGCCAGGGGTCCGCTGGTCCTACCCAGGATATCCTGTTCAGCAGGTCGAATGTTACATTCCTCCAGCCGCGACTGGATGTTGCGAAAAACCTCGCGTACATCGCGAACTCTGGCTCCCTTTGGCAGAACACAACTGCCGATCAGCCCGGTTGGAAATTCACCTTCGCACAAGGTGTGGACGCCAACAACAACGCGGTTATCGCAGTCAATACCACCAACCCGGACGGCTCTTATCGCTCGCAGGTCATGCGATGGGACTGGGCGTCCACGAACGTCATATTCAACAATCGCCCTCTGTTTGCTGGACAATATGTTCCGTGGGACTCCGGAAACTTTGATCCGGCCACCAAGCTCACTGTCGGTACTACCAACAATATTTCGGGGCCGACCGGAATTCGTAATACCACCAGCAATACCGGAAATATGAACACCTGGGGCTCCAGCTCCACAACTGCATCGTATGGAAACGCAGCTCTTCAAATCTTCGGTAGAGGGGGTGGCGAGCCTGCGGCCATCTACTTCGACAACTCCCAAACCGGCTGGTATTTGGGAATGGACAAGGACGGCCAATTGAAGCGAGCAGGCTGGTCGCTCGGCAATAACTCCTATGTGGTCACTGACGAGTCGAATATTCGGAATCACGTCAATGGAATGTCTGGCGCTCCTGTTTGGGGAGGTCAATGGTTCTGGGGTGAATGGAACTTCAACCCGAACACAAAGCTAACCATCAAAGCCGGCACGCAGGAGACTAGCAGCACTGCGATATTCAGCGGAACCCTGCCGTTTGCACCAATCGCGTCTCTGTCCGACTATTCCCAGGCGCCCCTGACGATTTATAACTCGCCGACTGGGCCATCTGCTAAGCCTGCTGTGATCGCGTTTATTCGCCCTGGGAACTGGGGCGCGTTCTTCGGCATCGATACCGACAACAAGCTGAAATGGGGCGGCGGATCGCTCGGCAACAACTCCAGGGAAATCGCCGATTCCAGCAACATCATGAATCTTTGGGCGTCCAACCCGACCGCGCCGTCCTGGAACGGCCAAACCGTCTGGCGATCCGGAAACTTTGATCCGGCGACGAAAGTGGATTTGAACGCCGCGAACGCCACCAACGGCAACATGATCTTCAACCGCATTTCGGGTACTGGTAGCGGCATCGCTTCGTCCGGTCGAGTTGGTGCCATCAACCTACAGAATGGCGCGCATTCAGGGCAAGCGGCCGCAGTCACTTTCGAGCGTGGTGGAAGTATCTTCGTCAACTTCGGCTTGGATACCGACAACGTTCTCAAAGTAGGTGGTGGAAACCTGGGGGCAAACGCCTACCCAGTCATCCACGCCGGGAACTACAACAACTACATCAACCAGGCGTTGGTTCAGGTCGGTCTGGGCGGAGTCGGTTCCTATGGCATTTTCGCGGTTCTGGATAATGCCGCTCCAATCGCAACCGTTCAACCCGGAGTGGTAGTGGACGGTTCCATTCTCATCTACTCGTCTTGCGCCGCAAACTACAATAGCGGTCAAAAACCTGCCGGAACTTGGCGCTGCATGGGATATGTAGTCAACAGAGACGCCAACACCCCTGACTCCGCGACCCTTTTCCAGCGAGTGACGTAA

Tertiary structure

PDB ID
465a3ea044853747979f2122dd406b9d3a62e01f92c288be66eee3e109c60a0b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6219
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lytic bacteriophages targeting P. aeruginosa isolated from hospital wastewater Nordstrom,H.R., Evans,D.R., Finney,A.G., Westbrook,K.J., Yassin,M.H., Doi,Y. and Van Tyne,D. 2021-07-09 — GenBank