Protein

View in Explore
Genbank accession
BAW98253.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MKVINGGIPGKPQDSVEIGHVYSQLALIMAKRAEQLRQTDEKVNKVVDRISAQRDRDYGNLERQLEDHINTKGLKHGENLSTLGLQMVNDFPFGSSENILTGDGWKTYLDPQALTDALQQWQYDEDPRVLARGNDFYTKNNLHLDTLFDARGIKDTDFVDEWKDFTPVVYHGGVIGPVNVKSGITYLPTLPYIQNHSVVEGVSLGVTDSDITAYGWGSKTLKRESTNEYFLLDDYHQHQPLSFTAPGTAGSLAKELAWLEINNDLQTGYGATCYAYDQGIALGLRKVVFGNKLSFDDTFTFTVNGRVMNDQIVTVPWDEYFPGKAVTVLHEGKVYGGLEHDEDLNQLTMFLLVHLNVDGITNLYVFRWEGNYSANACTLTLHPYKDDLLDVLPDNHAFHPVYGRGVIKSTGGHISGRHYGHRTYFLEHSYPHTSFRDLLDSREELLAGSILTEQRLVTNRHYSPLGNSLGRMLLTNDHTVINGQVHADGDWSHYLCHYDGKVGVGGNNFRFNHPVLIFPMAERTMLSREYVNTIQSNGKVGLAGTVWSNENDYQGVLDARGKVGGDIYGKPGYIVPEDLETFKAEHQEWLDFRGGLGYTALVVMQDGEQLHGLEIRADHLRYLDVAYLDVKLTVNGEYHLTRVGDRSVLNESEPAFKHVSNNRRWLMTDFYVHFHNEECHVVIQNPFKHVPGIFEFRLNNGNIGSVIKYVPQPDKAGLIDFAPVVMTLSGPCIPKRVEPGKGEYSNYYGVSVDRYAGEFNTTGLLAIEPGTRMEVNGDPFDIPPGLVARYTPNTKQYIYLTLTNGVVSVLVSGVPVERGQLYAIVETNGTVDLKIT
Physico‐chemical
properties
protein length:836 AA
molecular weight: 93735,06510 Da
isoelectric point:5,50823
aromaticity:0,10407
hydropathy:-0,36208

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage pTD1
[NCBI] 		1938577 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BAW98253.1 [NCBI]
Genbank nucleotide accession
AP017972 [NCBI]
CDS location
range 40028 -> 42538
strand -
CDS
ATGAAAGTCATTAATGGAGGTATCCCGGGCAAACCTCAGGACTCCGTAGAGATTGGTCATGTCTACAGCCAGCTCGCTTTGATTATGGCGAAGCGTGCGGAGCAATTAAGACAGACTGATGAGAAAGTCAACAAAGTGGTTGACCGTATCAGTGCTCAACGTGACCGTGATTACGGGAACTTAGAACGACAACTAGAAGACCATATCAACACCAAGGGATTGAAGCACGGAGAAAACCTCTCCACCCTAGGGTTGCAAATGGTAAACGACTTCCCCTTTGGTTCCTCAGAAAACATCTTGACGGGTGACGGATGGAAAACGTATCTGGATCCGCAAGCACTGACCGATGCTTTACAACAATGGCAGTATGACGAGGACCCAAGAGTACTGGCTCGTGGTAACGACTTCTACACTAAGAACAATTTGCACTTAGATACGTTGTTTGATGCACGTGGGATCAAAGACACTGACTTCGTGGATGAATGGAAAGATTTCACACCAGTGGTTTACCACGGCGGAGTAATTGGTCCGGTTAACGTTAAGTCAGGTATCACTTATTTACCAACCTTGCCTTACATTCAAAACCACAGCGTGGTGGAAGGTGTGAGTCTGGGGGTAACTGACAGTGACATCACTGCTTACGGATGGGGTAGTAAAACGCTTAAACGCGAATCGACCAATGAGTACTTTTTGTTGGACGACTACCATCAGCATCAACCGCTCTCCTTTACGGCTCCGGGAACCGCGGGCAGTTTGGCTAAAGAGTTAGCTTGGTTAGAGATCAACAACGATCTACAAACAGGCTATGGTGCAACGTGTTACGCTTACGACCAAGGGATTGCTCTGGGATTACGTAAAGTCGTCTTCGGTAATAAACTGTCTTTCGACGACACCTTTACGTTCACGGTAAACGGTCGTGTGATGAATGACCAAATCGTCACGGTACCTTGGGATGAGTATTTCCCGGGTAAAGCCGTGACGGTCCTACACGAAGGTAAAGTCTACGGTGGTTTAGAACACGATGAAGATTTGAATCAGCTGACGATGTTCTTGTTGGTTCATCTCAACGTTGATGGTATCACTAATCTTTATGTGTTCCGTTGGGAAGGGAATTACAGTGCTAATGCATGCACGTTGACATTGCATCCATATAAAGACGATCTCTTGGATGTATTGCCAGACAACCATGCGTTCCATCCGGTCTACGGTCGTGGTGTAATCAAATCGACAGGCGGACACATCAGCGGTCGTCATTACGGTCATCGCACTTACTTCTTGGAACACTCGTACCCACACACCAGTTTCCGAGACTTATTGGATAGTCGAGAAGAGTTGCTCGCAGGCTCTATTTTGACGGAACAACGTCTGGTCACTAACCGACATTATTCTCCATTAGGAAACAGCTTGGGTCGAATGTTGTTGACCAATGATCACACGGTCATCAATGGGCAAGTTCACGCGGATGGGGATTGGTCTCACTATTTGTGTCATTACGACGGCAAAGTGGGTGTCGGTGGGAACAACTTCCGATTCAATCACCCTGTACTCATTTTCCCGATGGCAGAACGTACTATGTTGTCTCGTGAATACGTCAACACCATCCAGTCAAATGGTAAGGTGGGGTTAGCAGGCACGGTTTGGTCGAATGAGAACGACTACCAAGGAGTCCTAGACGCTCGTGGTAAAGTAGGTGGCGATATCTACGGGAAACCGGGTTACATCGTCCCTGAGGATTTAGAGACGTTTAAAGCGGAACATCAAGAGTGGTTAGACTTCCGTGGTGGTTTAGGTTACACCGCTTTGGTGGTTATGCAAGACGGTGAGCAATTACACGGTCTGGAAATCCGTGCTGATCATCTTCGTTATTTAGACGTTGCTTACTTGGACGTGAAATTAACGGTGAATGGGGAATACCACTTAACTCGTGTAGGTGACCGAAGTGTTCTTAATGAAAGTGAACCTGCTTTCAAACACGTGTCCAATAACCGACGTTGGTTAATGACAGACTTCTATGTCCATTTCCATAATGAAGAATGTCATGTGGTAATTCAAAACCCATTTAAACACGTACCGGGTATTTTTGAATTCCGTCTCAACAACGGTAACATTGGTTCGGTGATCAAATACGTTCCACAACCGGATAAAGCAGGGTTAATTGATTTTGCTCCGGTAGTGATGACGTTAAGCGGACCTTGTATCCCTAAACGTGTGGAACCGGGTAAGGGCGAGTACTCTAACTATTATGGGGTGAGTGTGGACCGTTACGCTGGTGAGTTTAACACCACGGGGTTGTTGGCAATTGAACCGGGTACACGAATGGAGGTCAATGGCGACCCATTTGACATTCCACCGGGCTTAGTGGCACGTTACACACCTAACACAAAACAATACATCTACCTCACCCTAACCAATGGTGTTGTGTCTGTGTTGGTGAGTGGAGTTCCTGTTGAACGTGGTCAGCTTTACGCCATAGTAGAAACCAACGGAACCGTTGATTTAAAAATCACATAA

Tertiary structure

PDB ID
5cffa5e98d185254d70a09f677b68077f0bafc54f261d40670b70139fe86d732
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3414
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Vibrio Parahaemolyticus Bacteriophage pTD1 Midorikawa,Y. and Sano,M. 2017-07-13 — GenBank