Protein

View in Explore
Genbank accession
AFU63024.1 [GenBank]
Protein name
prophage tail super family protein
RBP type
TF
Evidence RBPdetect2
Probability 0,59
Protein sequence
MYVIAFKDVSNHELLADATITTKNGVNGEKSLSGVVYFGDGVKNGLAKGWTLTFNDEQYVVMTFKRNDSDNTVSFTAIEMFFYRFGSLSFYETWNGSHTFKQYLDALFKDTGYTYTNSADVAAFTKENWGMKTKIELFNDIIKQAGVEFKVLGKTVVIQPSIGSDLATVVRLGFNLKDAEIEEDNSSFATYGRGYGVYSDPNDTSSSRLSVEYYSPLYDQYKDKFGKIEAVPVDDQRFTVAANLLAEVKNRVDSSFSVSLTLNLIDLQNAGYPYAMAHPGDTITVVDEKLDYSSKVRITEVNSTYAINGNRVGITVSVGDKTMASSSGSKNASVIDTIGEVVNGNRPLDDAWFSERMLDATNAILDTQTELKFTRLGIIAVEKNNKNNMLILNSSGIGISNDGGQTFRTAITANAIDGQVINIKNLNAANIVAGKISGKDLSIDLDTGKVQFEHGLMQSSSGSFKINVDTGEVLFTHGIIKGQSMSIDLDMGKVHFSSGSIVGESSNGSSISLNMDTAILQSFNKRNEGFEVGDGRFDFYSDFFGSQKKKIASLYNNTFSDNAMGLTIDGANGIDTEAGVGTSTPARLVVGQGLNSAKGHVYAYGSQGVLIEGGNYETINMTPGEGTNYGSISSGKFALLGKGGMISTALANANLDIAAGAKLELSGTKEVRLQSKNTNVWGNLAVTGNKNAITPTRDGVRQTPAYEMAESYFGDIGETVTGDDCRVKVPIDVIFGDIVNTNYKYQVFLQSYSSAHVWVAERHDEYFIVESDQPNAPVAWELKARRRGHEQERLLKADIGFKAFDDTLDFDEEHKKKVLERQEELNNDSKNL
Physico‐chemical
properties
protein length:832 AA
molecular weight: 90730,02930 Da
isoelectric point:4,99776
aromaticity:0,09495
hydropathy:-0,30445

Domains

Domains [InterPro]
G3DSA:3.55.50.40
81–162
G3DSA:3.55.50.40
IPR010572
95–317
IPR010572
IPR007119
98–303
IPR007119
AFU63024.1
1 832
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage ATCC8014
[NCBI] 		2892340 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFU63024.1 [NCBI]
Genbank nucleotide accession
JX486087 [NCBI]
CDS location
range 12892 -> 15390
strand +
CDS
ATGTACGTGATTGCGTTCAAAGATGTAAGCAACCATGAGTTACTTGCGGACGCTACCATAACTACTAAAAACGGCGTCAACGGTGAAAAGTCACTGTCTGGCGTCGTTTATTTTGGTGATGGCGTTAAGAACGGTCTGGCAAAAGGTTGGACGCTGACTTTCAATGACGAGCAATATGTCGTTATGACATTCAAGCGCAACGACAGCGACAACACCGTTAGTTTTACTGCTATTGAAATGTTTTTCTACCGTTTCGGTTCGCTAAGTTTCTACGAAACATGGAACGGGTCACACACGTTCAAACAGTACCTCGACGCGTTATTTAAAGATACCGGATATACCTATACAAACTCGGCCGATGTCGCGGCGTTCACAAAAGAAAACTGGGGTATGAAAACCAAAATCGAGCTTTTTAACGACATTATTAAGCAAGCCGGGGTTGAGTTCAAGGTATTAGGCAAGACGGTCGTTATCCAGCCGTCAATCGGATCAGACCTTGCCACCGTTGTACGGCTAGGGTTCAACCTGAAAGACGCTGAAATCGAGGAGGATAACAGCAGTTTTGCTACTTACGGCCGTGGCTACGGCGTGTATAGCGACCCTAACGATACCAGTTCTAGCCGGTTGTCAGTCGAGTATTACAGCCCGCTTTACGACCAGTATAAAGACAAGTTTGGAAAAATAGAAGCCGTTCCAGTCGACGACCAACGTTTCACGGTTGCGGCTAACTTACTGGCCGAGGTTAAGAATCGCGTTGACAGCAGTTTCAGTGTTTCCCTAACGTTAAACCTCATCGACTTGCAAAATGCTGGTTATCCATATGCAATGGCACACCCCGGTGATACGATTACGGTCGTAGACGAAAAGCTTGATTACAGCAGTAAAGTACGGATTACCGAGGTTAACAGCACCTACGCTATCAACGGAAACCGGGTCGGTATCACCGTCAGCGTCGGCGATAAGACAATGGCCAGCTCGTCAGGATCAAAAAACGCCAGCGTTATTGACACGATTGGCGAGGTTGTAAACGGAAACCGGCCACTTGATGACGCGTGGTTTAGCGAACGTATGCTAGACGCGACCAACGCGATTCTAGACACGCAAACCGAGTTAAAATTCACTAGGCTAGGGATTATCGCCGTTGAAAAGAACAACAAAAACAACATGCTGATTCTTAATAGCTCAGGGATTGGTATTTCTAACGATGGCGGCCAAACGTTCCGAACAGCCATCACGGCCAACGCTATCGACGGTCAGGTTATCAACATTAAGAACCTAAACGCGGCTAACATTGTGGCTGGGAAAATCAGTGGTAAAGATTTAAGCATTGACCTTGATACCGGTAAAGTACAGTTCGAACACGGACTAATGCAGTCTTCCTCCGGGTCGTTTAAAATCAACGTCGACACCGGCGAGGTGCTATTTACCCACGGTATTATCAAAGGTCAATCAATGTCGATTGATTTAGATATGGGTAAAGTTCACTTTTCGTCCGGATCAATTGTCGGGGAATCTTCTAACGGTAGTTCGATTTCTCTCAACATGGACACGGCTATTTTGCAGTCGTTCAATAAGAGAAACGAGGGGTTCGAGGTTGGCGATGGGCGCTTTGACTTTTACTCAGATTTTTTCGGCAGTCAAAAGAAAAAAATCGCCAGCCTATACAACAACACGTTTTCCGACAACGCGATGGGGCTTACAATAGATGGTGCCAACGGTATCGACACAGAAGCCGGCGTTGGCACTAGTACGCCAGCGCGGCTTGTGGTAGGTCAGGGCCTTAACAGCGCCAAGGGTCACGTGTATGCGTATGGCTCACAAGGCGTTCTTATCGAGGGCGGAAATTACGAAACTATAAACATGACACCGGGAGAGGGTACGAACTATGGTAGTATCTCATCGGGAAAGTTTGCGCTTTTAGGTAAGGGCGGAATGATATCAACGGCCCTAGCTAACGCAAATCTAGATATTGCCGCCGGGGCAAAGTTAGAACTATCTGGTACGAAAGAAGTTAGATTGCAAAGTAAAAACACTAACGTGTGGGGTAACCTAGCCGTTACCGGGAATAAAAACGCGATTACCCCCACCCGTGACGGTGTGCGTCAAACACCAGCATATGAAATGGCTGAAAGCTATTTCGGCGACATTGGCGAAACTGTAACCGGTGATGATTGCCGTGTTAAAGTCCCAATTGATGTTATTTTTGGCGATATCGTTAACACAAACTACAAGTACCAAGTATTTTTACAATCGTATAGCTCGGCACACGTGTGGGTTGCCGAACGACACGACGAGTATTTCATTGTCGAATCCGACCAGCCGAACGCGCCCGTTGCGTGGGAGCTAAAAGCACGGCGGCGCGGTCACGAGCAAGAAAGACTGTTAAAGGCGGACATTGGTTTTAAAGCGTTCGATGATACACTTGATTTTGATGAGGAACATAAGAAAAAGGTACTAGAACGACAGGAGGAGTTAAACAATGACAGTAAGAACCTATAA

Tertiary structure

PDB ID
d261eb2eac164e5e497c410fe62a3c65fb0d3629cd58cd541d81969765ba65e5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2752
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Two Virulent Phages of Lactobacillus plantarum Briggiler Marco,M., Garneau,J.E., Tremblay,D., Quiberoni,A. and Moineau,S. 2012 23042172 GenBank