Protein

View in Explore
Genbank accession
YP_009789953.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MIKNSVVTGRKGGSSKPHTPQEMEDNLISINKIKVLLAVSDGEVDANFSLKDLYLNDVPVIAPSGEVNYEGVKAEFRPGTQTQDYIKGFNDTAAEFTVGRELTTTTPYVISVTNKQLSAVRVKILMPRGVTTKENGDMVGVVVKWAVDMAVDGGSYQEVLLDTIDGKTLSGYDKTKRIDLPSFNSQVLLRVRRVTPDSNNSRVVDAINIQSYAEVIDAKFRYPLTGLIYVEFNSELFPQIPSISTKKKWKIINVPSNYDPVLREYSGTWDGSFKKAWSNNPAWVLYDLITNQRYGLDQRELGIAVDKWSLYDAGQYCDQKVPDGHGGLEPRYLCDVVIQSQVEAYNLVRDICSIFRGMSFWNGESLSIVIDRPREASYIFTNDNVVDGSFAYTFASEKSMYTTCNVTFDDEQNMYSQDIEGVFDLNASLRFGHNPTAITAIGCTRRSEANRRGRWVLKTNLRSTTVSFATGLEGMIPMIGDVVAIADNFWSSNLTLSLSGRVMEVSGLQVFTHFKVDARAGDFIIVNKPDGNPVRRTISKVSADGKTIELNVGFGFDVKPNTVFAIDRTDVALQQYVVTGITKGDGDDEFTYSITAVEYDPNKYDEIDYGVNIDDRPTSIVDPDNMQPPKNIVVSSYSRIVQGMSVETMVVGWDKVQYASKYDVQWRKDNGNWMNVPRTASSEIEVEGIYAGNYHVRVRSISSGGNTSPWSDVVSVGLTGKIGKPDKPTVITASDDQVFGIRVKWGFPEGSGDTAYTELQQIPDNGAGGHTGEENASLLTMIPYPQYEYWHSTLPAGYVNWYRARLVDRIGNASDWSDIVRGMASDDVESIIGEIKVDIENSDGFKYLQQNAIESNGAIQAQAESILENALANDTDVRRMTKENGKRKAEYVQAVNLIADETQARVEALTALKAQIDDEVVASITEVQTALATETEARTTADTALSARLGDTQASLNEKLDSWVDAESAGAQYGVKLGLKYNGVEYSAGMSMELVGSGAGVKSQFIFDANRFAISNGIGSGSGQWALPFVVESNQVFIQSAVIKDGSITNAKIGNRIQSNNYVAGSAGWAIDKSGGAELNSATVRGSLYANNGNFAFNGTNNTVQINNNGITVNLPNGGRVVVGVW
Physico‐chemical
properties
protein length:1126 AA
molecular weight: 123414,44620 Da
isoelectric point:4,87323
aromaticity:0,08970
hydropathy:-0,29547

Domains

Domains [InterPro]
IPR053171
3–881
IPR053171 Coil IPR015406
IPR055385
93–218
IPR055385 IPR032876 IPR013783
IPR036116
627–716
IPR036116
IPR003961
628–716
IPR003961
IPR003961
628–722
IPR003961
YP_009789953.1
1 1126
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_ESCO41
[NCBI] 		2496547 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009789953.1 [NCBI]
Genbank nucleotide accession
NC_047820 [NCBI]
CDS location
range 25518 -> 28898
strand +
CDS
ATGATTAAAAATAGTGTAGTGACGGGCAGAAAGGGTGGAAGCAGTAAACCTCACACCCCACAAGAGATGGAAGATAACCTGATCTCAATCAATAAGATTAAGGTTTTGCTCGCCGTTAGTGATGGTGAGGTTGACGCGAATTTCTCATTAAAGGACTTATATCTTAATGACGTACCTGTAATTGCACCCTCTGGAGAAGTTAACTATGAAGGCGTTAAGGCTGAATTTCGCCCAGGCACACAGACGCAGGACTACATCAAGGGATTTAACGACACGGCAGCTGAGTTCACCGTAGGTCGTGAATTGACGACTACGACTCCTTACGTGATCTCGGTAACGAATAAGCAGCTATCGGCCGTTCGCGTAAAAATCCTGATGCCTCGCGGCGTTACCACGAAAGAAAACGGCGATATGGTCGGCGTGGTCGTGAAGTGGGCCGTAGATATGGCGGTTGATGGAGGGAGCTACCAGGAAGTTTTGCTGGACACTATAGACGGGAAAACACTAAGCGGATATGACAAAACGAAGCGCATTGACTTGCCGTCGTTTAATAGCCAAGTCCTGCTTCGGGTTCGTCGTGTCACTCCAGATTCTAATAATTCAAGAGTTGTTGACGCGATCAACATTCAGTCATATGCGGAAGTTATTGACGCTAAATTCCGTTATCCTCTGACTGGCCTTATTTACGTTGAGTTTAACAGTGAGCTGTTCCCGCAGATCCCAAGCATTAGCACGAAAAAGAAATGGAAGATCATCAACGTTCCGAGCAACTACGACCCAGTGCTGAGAGAATACAGCGGCACATGGGATGGCAGTTTTAAAAAAGCGTGGTCAAATAACCCCGCTTGGGTGCTTTATGATTTGATTACCAATCAGAGATACGGGCTCGATCAACGTGAATTGGGGATCGCGGTCGATAAGTGGTCGCTCTATGACGCTGGGCAATACTGCGATCAGAAAGTTCCTGACGGTCACGGAGGGTTGGAGCCTCGCTACCTTTGCGATGTGGTGATCCAATCTCAGGTTGAAGCGTATAATCTGGTTCGAGATATTTGCTCAATCTTCCGAGGGATGAGCTTCTGGAACGGTGAGAGCCTTTCAATTGTCATCGACCGACCGAGAGAGGCTTCATACATTTTCACTAACGACAACGTCGTTGATGGCTCATTTGCCTACACGTTCGCGAGCGAAAAAAGCATGTACACAACTTGTAACGTCACGTTCGACGACGAGCAGAACATGTACAGCCAGGACATCGAGGGGGTATTCGACCTTAACGCTTCATTACGATTCGGTCATAACCCAACGGCAATAACTGCAATCGGGTGTACTCGACGCAGTGAGGCTAACCGCCGAGGCCGCTGGGTTCTTAAAACAAACCTTCGAAGCACGACCGTGAGTTTTGCAACTGGCCTTGAGGGTATGATTCCGATGATTGGCGACGTAGTGGCTATCGCTGATAACTTTTGGTCAAGCAACCTGACGCTTTCATTATCAGGTCGTGTCATGGAAGTATCTGGACTGCAAGTGTTCACTCACTTTAAAGTCGATGCTCGTGCTGGTGACTTTATTATCGTCAATAAGCCTGACGGTAATCCGGTTCGCCGTACTATTTCAAAGGTATCGGCAGACGGAAAGACGATTGAGCTTAATGTTGGTTTTGGTTTTGATGTTAAGCCCAACACTGTTTTCGCAATCGACAGAACTGACGTGGCTTTGCAGCAATACGTCGTAACTGGAATCACGAAGGGTGACGGTGATGATGAGTTCACATACAGCATCACGGCGGTTGAGTATGATCCCAATAAATACGACGAGATCGACTACGGAGTAAATATTGATGACCGACCAACCAGTATTGTAGATCCTGACAACATGCAGCCACCAAAAAACATTGTTGTTTCATCATACTCTCGAATCGTGCAGGGGATGAGCGTTGAGACAATGGTGGTAGGATGGGATAAAGTTCAGTACGCAAGCAAGTACGATGTGCAGTGGAGAAAGGATAACGGTAACTGGATGAACGTACCGCGTACAGCAAGCTCAGAGATTGAGGTTGAAGGGATTTATGCGGGTAATTATCACGTACGCGTAAGGAGCATATCAAGCGGTGGAAACACGTCTCCATGGTCTGATGTTGTCAGCGTTGGGTTGACTGGTAAGATTGGGAAGCCAGATAAACCAACAGTCATAACCGCATCTGACGACCAGGTGTTTGGGATACGGGTTAAATGGGGATTTCCAGAAGGTTCTGGCGATACTGCATACACGGAGTTGCAGCAGATACCAGATAATGGTGCTGGAGGTCACACTGGTGAGGAGAATGCGAGTCTATTAACAATGATTCCATACCCACAGTACGAGTACTGGCACTCGACACTGCCAGCAGGATATGTAAACTGGTACAGGGCAAGATTGGTAGACAGGATTGGTAACGCCTCTGACTGGTCTGACATTGTTCGCGGAATGGCAAGCGATGACGTTGAGTCCATCATTGGAGAAATAAAGGTTGATATCGAGAATTCCGATGGGTTTAAGTACCTACAGCAGAACGCCATTGAGTCAAACGGAGCTATTCAGGCGCAGGCGGAATCAATTCTTGAAAACGCACTTGCAAACGATACTGACGTGCGACGAATGACCAAGGAGAACGGCAAGAGAAAGGCTGAATACGTTCAGGCAGTGAATCTTATTGCCGATGAAACTCAGGCTCGCGTAGAGGCTCTCACGGCCCTTAAGGCGCAGATAGATGATGAAGTTGTAGCATCGATTACAGAAGTTCAGACTGCATTAGCCACAGAGACAGAAGCAAGGACTACAGCAGACACGGCTTTGAGCGCTCGACTTGGCGATACGCAGGCCTCGCTTAATGAAAAACTTGACTCTTGGGTAGATGCGGAATCTGCTGGCGCTCAGTACGGCGTTAAGTTAGGACTCAAATACAATGGGGTTGAGTATAGCGCAGGGATGAGCATGGAACTTGTTGGAAGTGGTGCTGGCGTTAAGAGTCAGTTCATCTTTGACGCAAACAGATTCGCTATCAGTAACGGGATTGGATCTGGTTCCGGTCAGTGGGCATTGCCTTTTGTTGTTGAGAGCAACCAGGTGTTCATCCAGAGCGCGGTGATCAAGGATGGCTCAATCACTAATGCCAAGATTGGCAACAGGATTCAGTCAAACAACTACGTGGCAGGTAGTGCTGGATGGGCGATTGACAAGAGTGGGGGTGCTGAACTCAATAGCGCAACAGTTCGCGGAAGCCTATATGCGAACAATGGTAACTTTGCGTTTAATGGAACAAACAATACTGTTCAGATTAACAACAATGGAATTACAGTAAACTTACCGAATGGAGGAAGGGTTGTAGTTGGAGTATGGTAA

Tertiary structure

PDB ID
e5c5d49c03404c9b4a86e3ac8bd55eb842e471c1ff53683ddecf25391e08298e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7825
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a new coliphage vB_EcoS_ESCO41 Trotereau,A. and Schouler,C. 2014-02 — GenBank