Protein

View in Explore
Genbank accession
QDH45007.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MSKTGKGLPRSLQNVDFGDLDISVGWGEVTGKPAVIAAGATQEAARTAIGAGTSSLVIGTTSTTAMAGNKFVQGAAVTNVGTQTVAGEDAGAVATSATTAVNNVASQLNALLAQLRAAKIIAS
Physico‐chemical
properties
protein length:123 AA
molecular weight: 12001,36790 Da
isoelectric point:8,14005
aromaticity:0,02439
hydropathy:0,26911

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SI2
[NCBI] 		2575320 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDH45007.1 [NCBI]
Genbank nucleotide accession
MK761199.1 [NCBI]
CDS location
range 17554 -> 17925
strand +
CDS
ATGTCAAAGACAGGTAAAGGGCTACCCCGCAGCCTTCAGAATGTCGACTTCGGCGACTTGGATATCAGCGTAGGCTGGGGAGAAGTAACAGGTAAACCGGCGGTAATCGCCGCAGGGGCGACCCAAGAGGCGGCGCGTACCGCTATTGGCGCGGGTACGTCAAGCCTTGTGATCGGAACAACTTCGACTACCGCGATGGCCGGGAATAAGTTCGTTCAGGGCGCCGCGGTTACAAACGTCGGCACGCAGACCGTAGCCGGCGAGGACGCGGGGGCTGTGGCCACTTCGGCGACTACCGCGGTCAACAACGTGGCGTCGCAACTAAACGCCTTACTGGCACAGCTTCGTGCCGCTAAAATCATCGCATCCTGA

Tertiary structure

PDB ID
5b68d308f3dd52bd390c7fc1898f85128f046d944ec4bf57ff49afbd3bbc2026
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6491
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Salmonella bacteriophage diversity and host specificity revealed by physiological characterization and whole genome sequencing Fong,K., Wang,S., Delaquis,P., Tremblay,D., Moineau,S., Levesque,R. and Goodridge,L. 2019-09-14 — GenBank