Protein

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Genbank accession
CAX63162.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,59
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MALIYDFNPDLDPKAKSKFVGARGRRDISDVLDFCDGGVAIQDPSQGMMVRVWRTELRQDGTYLGHEDGSNEIRIGGGIEEGISTMSLDFDSNMNYVCAFVRADRTGAISYFNVQQGRRLLVELGQVDYAKVALDDKRPGATAWAQVIVPYTRNGNLYVRTQNENYTEEHLEVDTGKVFRPLVKCGMGTNLRFQVQFRGHM
Physico‐chemical
properties
protein length:201 AA
molecular weight: 22610,25380 Da
isoelectric point:5,65448
aromaticity:0,09453
hydropathy:-0,42090

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage phikF77
[NCBI] 		627480 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAX63162.1 [NCBI]
Genbank nucleotide accession
FN263372 [NCBI]
CDS location
range 38221 -> 38826
strand +
CDS
ATGGCACTGATCTACGACTTCAACCCGGACCTTGATCCGAAGGCTAAGTCCAAGTTCGTAGGTGCGCGAGGCCGTAGGGACATCAGCGACGTGCTGGACTTCTGCGACGGGGGTGTGGCTATCCAGGACCCGTCGCAGGGCATGATGGTCCGCGTGTGGCGAACAGAGCTTCGCCAGGACGGGACCTACCTGGGTCACGAGGACGGCTCGAACGAGATTCGCATCGGCGGAGGTATCGAAGAAGGTATCTCCACGATGTCCCTCGACTTCGACAGCAACATGAACTACGTGTGTGCTTTCGTACGAGCCGACCGGACTGGTGCAATCTCCTACTTCAACGTGCAGCAGGGCCGCCGGCTCCTCGTGGAGCTTGGGCAGGTTGACTATGCCAAGGTGGCTCTGGACGACAAACGTCCGGGGGCTACCGCCTGGGCGCAGGTTATCGTGCCCTACACACGCAACGGGAACCTCTACGTCCGCACGCAAAATGAGAACTACACCGAAGAGCACCTGGAGGTGGATACCGGCAAGGTATTCCGGCCTCTGGTGAAATGCGGTATGGGCACCAACCTCCGCTTCCAAGTCCAATTCAGAGGGCACATGTAA

Tertiary structure

PDB ID
6d6eab4393f1b40190530a32ea54690a119c9a4d0ee3032ea8772ed505c60f12
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6011
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomes of phiKMV-like viruses of Pseudomonas aeruginosa contain localised single-strand interruptions Kulakov,L.A., Ksenzenko,V.N., Shlyapnikov,M.G., Kochetkov,V.V., Del Casale,A., Allen,C.C.R., Larkin,M.J., Ceyssens,P.J. and Lavigne,R. 2009-08 — GenBank