Protein

View in Explore
Genbank accession
QHB38896.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,64
Protein sequence
MANLINSNLDETGNLLSVNSLLRNSPTINFDSSSMSSNYEITDELQINSNALSFKATLVQNVITNLSSNFDFGDALEFTAKINGVHSFSFYLLQGDINANLPYNVDVKLKVYINDTLIETDTINVDLANGNPFQRLSQSFYVNKDEVVNFKFRVEKDSVGNPSPNIELFFTGFQANYGNVNDYNIPYGGFKEYQGTWDYANTLTAQSFVDTAIYLENNGLGAFTNKTYKISGIEDIFDTSSNQFDFSLLDLGDRVDVRLDLSITTTSSNQSVKASIELGIGDTPYEVSFLDRDYKAIGTYNITISNWIYIGNEMTKDMPAKVKFFSDDNATILVNGWAVNVIKKK
Physico‐chemical
properties
protein length:345 AA
molecular weight: 38525,27590 Da
isoelectric point:4,36162
aromaticity:0,12174
hydropathy:-0,24087

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Flavobacterium phage vB_FspS_hemulen6-2
[NCBI] 		2686248 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHB38896.1 [NCBI]
Genbank nucleotide accession
MN812209 [NCBI]
CDS location
range 34894 -> 35931
strand +
CDS
ATGGCAAATTTAATAAATTCAAATTTAGATGAAACGGGAAATTTATTAAGTGTTAATTCACTTCTTAGAAATAGTCCTACAATTAATTTTGATTCAAGTTCGATGTCAAGCAATTACGAAATAACAGACGAATTACAAATTAATAGTAATGCGTTATCTTTTAAAGCTACTTTAGTACAAAATGTAATTACTAACCTTTCGTCTAATTTTGATTTCGGTGATGCATTAGAATTTACAGCAAAAATAAATGGAGTTCACTCGTTTTCATTTTATCTTTTACAAGGGGATATAAACGCAAATTTACCATATAATGTTGATGTAAAATTAAAAGTCTATATTAATGATACTTTAATTGAAACTGATACTATAAACGTTGATTTAGCAAACGGTAATCCGTTTCAAAGGCTTTCACAAAGTTTTTATGTAAATAAAGATGAAGTTGTAAATTTTAAATTTAGAGTAGAAAAAGATAGCGTAGGGAATCCTAGTCCTAATATTGAATTATTTTTTACAGGTTTTCAAGCTAATTATGGAAATGTAAACGATTATAATATCCCTTATGGGGGTTTTAAAGAATATCAAGGGACTTGGGACTATGCAAATACACTTACTGCTCAATCTTTCGTTGATACGGCTATTTATTTAGAAAATAACGGACTTGGAGCTTTTACAAATAAAACTTATAAAATATCTGGAATTGAGGATATTTTCGACACTTCAAGTAATCAATTTGACTTTAGTCTATTAGACTTAGGTGATAGAGTTGATGTAAGATTAGATTTATCAATAACTACAACATCTTCAAATCAATCTGTAAAAGCGTCTATCGAATTAGGAATAGGAGATACGCCATACGAAGTTTCTTTTTTAGATAGAGATTACAAAGCAATCGGAACATATAATATTACTATTAGTAATTGGATTTATATAGGTAATGAAATGACAAAAGATATGCCCGCAAAAGTGAAATTCTTTTCAGATGATAATGCTACTATCTTAGTAAATGGATGGGCTGTTAATGTTATAAAAAAGAAATAA

Tertiary structure

PDB ID
8188915bfc0c5453c7db440499d22d259f7d1adeefb3205968d67c4a7407a2ed
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5713
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diversity and Host Interactions Among Virulent and Temperate Baltic Sea Flavobacterium Phages Nilsson,E., Bayfield,O.W., Lundin,D., Antson,A.A. and Holmfeldt,K. 2020 — GenBank