Protein

View in Explore
Genbank accession
QHB41508.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MPTITVLVAPEVVRNKPETERLHTVTGTALGWEKTSLNQDPDEILTECKGLDALLTQSNLQADGVTKVDPTKPIGFEITYEIHDPSAVLTTGLAITPATAGGEVGQVVELLATVAPANATYQGVNWYSGDITKAVHIGGGKFKLLASGSVTVYGVTIEGGHTDSTVITVAGALALSTDLAASQDVTAGADATFTIAATGGTTPYTYAWYFSDVPGGAGAVIDAGANATAATASLVITAVDAADEGEYWCVVEDADGHSVTSARCEMAVV
Physico‐chemical
properties
protein length:269 AA
molecular weight: 27460,30420 Da
isoelectric point:4,24152
aromaticity:0,05948
hydropathy:0,19368

Domains

Domains [InterPro]
G3DSA:2.60.40.1080
85–170
G3DSA:2.60.40.1080 IPR013783
IPR007110
164–260
IPR007110
IPR003599
180–269
IPR003599
IPR036179
181–261
IPR036179
PF13927
183–252
PF13927
cd00096
191–261
cd00096
QHB41508.1
1 269
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Dickeya phage Ds5CZ
[NCBI] 		2686435 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHB41508.1 [NCBI]
Genbank nucleotide accession
MN813048 [NCBI]
CDS location
range 5504 -> 6313
strand +
CDS
ATGCCAACAATCACTGTATTAGTAGCACCGGAAGTTGTTCGCAACAAACCGGAAACCGAGCGTCTGCACACTGTCACAGGCACTGCTCTGGGTTGGGAAAAGACCAGTCTTAACCAAGACCCAGACGAGATCCTGACTGAGTGTAAAGGTCTGGATGCACTGCTGACCCAGAGTAATCTGCAGGCGGACGGTGTGACCAAAGTTGATCCAACCAAGCCTATCGGCTTTGAGATCACCTACGAAATCCACGACCCAAGCGCTGTGCTGACAACTGGTCTGGCCATCACCCCTGCAACTGCAGGCGGCGAAGTCGGTCAGGTTGTTGAACTGCTGGCGACCGTCGCTCCGGCGAACGCGACCTATCAGGGCGTCAACTGGTACTCGGGTGACATTACCAAAGCCGTTCACATTGGCGGTGGCAAATTCAAGCTGCTGGCATCGGGTTCAGTGACCGTCTATGGTGTAACCATCGAAGGTGGTCACACTGACTCCACGGTCATCACAGTAGCGGGTGCGCTGGCTCTGTCTACTGATCTGGCCGCTTCTCAGGACGTGACAGCAGGCGCTGACGCAACCTTCACCATCGCTGCTACAGGCGGCACCACACCGTACACGTATGCTTGGTACTTCTCTGATGTCCCTGGCGGCGCTGGTGCGGTGATTGATGCAGGCGCTAATGCCACTGCAGCTACCGCAAGCCTGGTTATCACGGCAGTTGATGCCGCAGATGAGGGTGAGTACTGGTGTGTTGTTGAAGACGCCGACGGCCACTCTGTGACATCTGCTCGTTGCGAAATGGCTGTGGTCTAA

Tertiary structure

PDB ID
b6bb416d0fc447195aa1fc36f3a14eb04c9e86a1de7e284f5c835e2d0a6a32c4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7189
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diversity of bacteriophages infecting Dickeya solani isolated in Czechia Petrzik,K., Vacek,J., Souckova,S., Kmoch,M., Kopacka,V., Sevcik,R. and Koloniuk,I. 2021-02-09 — GenBank