Protein

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Genbank accession
YP_009613622.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,77
TF
Evidence Phold
Probability 1,00
Protein sequence
MTIRLYGILTDGLNKPIVNATVSLIARSNTLIVLGSSEAIFRTDSQGAYNITMNPGHYVVIVGPQGKEPYKAGEIVLYADSPDGSLNGYLVNWVEEELTPDVIKQVQQLVAASEEYSLQAGRSAAAANADATDARNSKASAAQSASDALVYKNDAKASEDAAKQAQAGAAGSANTASQAVTTIQGLKSDVEQLKAETTTLKDAAAASAAQASNSATEAGQQASNAAGSAQSASTDAGRAEVAAGKAEGIIGKSLLKENNLSDLSDINIARQNLRLHAFDSVGGHTFIYSPDGNYRIVLRNGDGLFIVQTSDGATTKPILIGAGGTGADNITDAKKNLEIASFKSTDEQSLIYSPDISKYAIFIKDNGDWGCLTMSDGERHPLAINAGGTGATTPDGVRHILGLATNHIPVFLGVYLDDNNGQSFRHSLP
Physico‐chemical
properties
protein length:429 AA
molecular weight: 44560,75130 Da
isoelectric point:4,94990
aromaticity:0,05361
hydropathy:-0,21632

Domains

Domains [InterPro]
IPR013609
1–134
IPR013609 Coil
G3DSA:2.60.40.1120
5–92
G3DSA:2.60.40.1120
IPR008969
5–73
IPR008969
YP_009613622.1
1 429
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SE1 (in:Nonagvirus)
[NCBI] 		2115848 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009613622.1 [NCBI]
Genbank nucleotide accession
NC_042025 [NCBI]
CDS location
range 58358 -> 59647
strand -
CDS
ATGACAATTCGTCTATATGGTATCCTAACAGATGGTTTGAATAAACCTATTGTTAATGCAACCGTATCCTTGATAGCAAGAAGTAACACACTCATAGTGTTAGGTAGTAGCGAAGCAATATTCCGTACAGATTCTCAAGGTGCATATAATATCACAATGAACCCAGGACACTATGTGGTTATAGTGGGTCCTCAAGGAAAAGAACCATATAAGGCTGGAGAAATTGTCCTATATGCAGATAGTCCGGATGGGTCACTTAATGGTTATCTTGTTAATTGGGTGGAAGAAGAACTAACACCAGATGTTATCAAACAAGTTCAACAACTTGTGGCTGCTTCTGAAGAATACTCTTTGCAAGCTGGCCGCTCTGCTGCGGCAGCAAACGCAGATGCTACGGACGCTCGTAATAGTAAGGCTTCAGCTGCTCAATCTGCTTCAGATGCACTTGTCTATAAAAATGATGCTAAAGCTAGTGAAGACGCTGCTAAACAAGCACAGGCTGGCGCTGCTGGTTCCGCTAATACTGCATCACAAGCTGTGACCACAATTCAAGGTCTAAAATCTGACGTTGAGCAGTTAAAAGCGGAGACTACCACACTAAAAGACGCTGCCGCTGCTTCAGCTGCACAAGCAAGCAATAGTGCTACCGAAGCAGGACAACAAGCTAGCAATGCTGCTGGTAGCGCACAAAGCGCATCTACAGACGCTGGGCGCGCGGAAGTAGCTGCTGGCAAAGCTGAAGGCATTATTGGTAAATCGTTACTAAAAGAAAATAATCTTTCCGATTTATCCGACATAAACATTGCAAGACAAAACCTCCGCTTACATGCGTTTGATAGTGTTGGCGGTCATACTTTTATTTACTCACCAGACGGGAATTATAGAATTGTCTTAAGAAACGGAGACGGTCTATTTATTGTTCAGACCTCAGATGGTGCAACAACAAAACCAATTCTCATTGGTGCAGGTGGTACTGGCGCCGATAATATAACTGACGCTAAGAAAAATCTGGAGATTGCATCATTCAAAAGTACAGACGAACAAAGTTTAATATACTCCCCTGATATTTCCAAATATGCAATTTTTATAAAGGATAACGGCGATTGGGGATGTCTTACAATGTCTGACGGAGAAAGACATCCTTTAGCTATCAACGCTGGCGGTACAGGTGCAACAACTCCAGATGGAGTAAGGCACATTTTAGGGCTTGCGACAAATCATATTCCTGTGTTCTTGGGTGTATATCTTGATGACAACAACGGCCAATCATTCCGGCATTCTTTACCTTAG

Tertiary structure

PDB ID
899e82d558fb6bd3830d29991c95f518b9ea8c916612ec485e6c5a3b893b6ce1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8117
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Lytic Bacteriophage SE1 Infecting Salmonella Enteritidis Isolates Kim,D., Kim,Y.J., Han,B.K. and Kim,H. 2012-09-15 — GenBank