Protein

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Genbank accession
AAP20540.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MANVIKTVLTYQLDGSNRDFNIPFEYLARKFVVVTLIGVDRKVLTINADYRFATRTTISLTKAWGPADGYTTIELRRVTSTTDRLVDFTDGSILRAYDLNVAQIQTMHVAEEARDLTADTIGVNNDGHLDARGRRIVNLANAVDDRDAVPFGQLKTMNQNSWQARNEALQFRNEAETFRNQTEVFKNESGTNATNTKQWRDEANGSRDEAEQFKNTAGQYATSAGNSATAAHQSEVNAENSATAAANSANLAEQHADRAEREADKLGNFNGLAGAIDRVDGTNVYWKGGIHANGRLYLTSDGFDCGQYQQFFGGSAGRYSVMEWGDENGWLMYVQRREWTTAIGDNIQLLVNGHIIAQGGDMTGPLKLQNGHALYLESASDKAQYILSKDGNRNNWYIGRGSDNNNDCTFHSYVYGTNLTLKPDYAVVNKRFHVGQAVVATDGNIQGTKWGGKWLDAYLNDTYVKKTKAWTQVWAAAGGSYMGGGSQTDTLPQDLRFRNIWIKTRNNYWNFFRTGPDGIYFLLAEGGWLKFQIHSNGRVFKNISDRDAPPTAIAVEDV
Physico‐chemical
properties
protein length:558 AA
molecular weight: 62063,77710 Da
isoelectric point:5,98540
aromaticity:0,10573
hydropathy:-0,56935

Domains

Domains [InterPro]
IPR005604
1–131
IPR005604 Coil G3DSA:6.20.80.10 G3DSA:6.20.70.20 G3DSA:2.60.320.30
IPR048388
371–463
IPR048388 IPR022246
AAP20540.1
1 558
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage phiA1122
[NCBI] 		227720 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Yersinia pestis
[NCBI] 		632 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Yersinia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAP20540.1 [NCBI]
Genbank nucleotide accession
AY247822 [NCBI]
CDS location
range 32241 -> 33917
strand +
CDS
ATGGCTAACGTAATTAAAACCGTTTTGACTTACCAGTTAGATGGCTCCAATCGTGATTTTAATATCCCGTTTGAGTATTTAGCCCGTAAGTTCGTAGTAGTAACCCTTATTGGCGTAGACCGCAAGGTCCTTACGATTAATGCAGACTACCGTTTTGCTACGCGTACTACCATCTCACTTACCAAGGCTTGGGGTCCAGCGGATGGATACACTACCATCGAGTTACGCCGAGTAACCTCCACAACCGACCGATTGGTTGACTTTACGGATGGTTCAATCCTCCGTGCGTATGACCTTAACGTCGCTCAGATTCAAACGATGCACGTAGCGGAAGAGGCCCGTGACCTCACTGCTGATACCATAGGTGTCAATAATGATGGTCATTTGGATGCTCGTGGTCGTCGAATTGTTAACCTAGCGAACGCTGTGGATGACCGCGACGCTGTTCCGTTTGGTCAACTTAAGACCATGAACCAGAACTCGTGGCAGGCGCGTAATGAGGCACTACAGTTCCGTAATGAGGCTGAGACTTTCAGAAATCAAACGGAGGTTTTTAAGAATGAGTCCGGTACTAACGCTACGAACACAAAGCAGTGGCGAGATGAGGCTAATGGGTCCCGAGATGAAGCCGAGCAGTTCAAGAATACGGCTGGTCAATACGCTACATCTGCTGGGAACTCTGCTACTGCTGCGCATCAATCTGAGGTAAACGCTGAGAACTCCGCTACAGCAGCAGCGAACTCTGCGAATTTGGCAGAACAACACGCAGACCGTGCGGAACGTGAAGCAGACAAGCTGGGGAATTTTAATGGACTGGCTGGTGCAATTGACAGGGTGGATGGAACCAATGTGTACTGGAAAGGAGGTATCCATGCGAACGGACGCCTTTACCTTACCTCAGATGGTTTCGACTGTGGTCAGTATCAACAGTTCTTTGGTGGTTCTGCTGGTCGTTACTCTGTCATGGAGTGGGGTGATGAGAACGGATGGCTGATGTATGTTCAACGTAGAGAGTGGACAACAGCGATAGGTGATAACATCCAGCTATTAGTAAACGGACATATCATCGCCCAAGGTGGAGACATGACTGGTCCGCTGAAATTGCAGAATGGACATGCCCTTTACTTAGAGTCCGCATCCGACAAGGCGCAATATATTCTATCTAAAGATGGTAACAGAAACAACTGGTACATTGGTAGAGGATCAGATAACAACAATGACTGTACCTTCCACTCCTATGTGTATGGTACGAACTTAACACTCAAGCCGGACTATGCAGTAGTTAACAAACGCTTCCACGTAGGTCAGGCAGTTGTAGCCACTGATGGTAATATTCAAGGTACTAAGTGGGGAGGTAAGTGGCTTGATGCTTACCTAAACGATACTTACGTTAAGAAGACAAAGGCCTGGACTCAAGTATGGGCTGCTGCTGGAGGTAGTTACATGGGAGGAGGTTCTCAGACTGATACTCTCCCACAGGACTTGCGATTCCGCAACATATGGATTAAGACCAGAAACAACTATTGGAACTTCTTCCGAACTGGTCCTGACGGTATCTACTTCCTTTTAGCCGAGGGCGGTTGGCTAAAATTCCAGATACACTCTAATGGCAGGGTATTTAAGAACATATCGGATAGAGATGCGCCTCCAACAGCAATAGCCGTAGAGGACGTGTAA

Tertiary structure

PDB ID
b52688302df2559fdf274b7d94dc047f197964ad1e9e2f0a9cfa4c768bc7f388
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7278
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50