Protein

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Genbank accession
YP_009986346.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence RBPdetect
Probability 0,65
TSP
Evidence RBPdetect2
Probability 0,93
TF
Evidence Phold
Probability 1,00
Protein sequence
MSTTITNLPETSKVNGSDYLVLDQPDKTVKSTVSNFLTDTGVVLATQLKDSGGAGLIGDIPKPITWGGFAGGAKGDSESNTVAITAANNTGLTYLVPEGYWPNTVDATFNIYPSFRNYSGGFKLKRGLPGAGAENPYPLIWAEKTSKMKREEGGTKWFDVAMQGTITLEPEASAFGIGVSGYVRSSAGDVLTSGKSVDAIGVHGSGKAIGRNGRVWGLWGQAGNGNDGSGVRSSQLVGCELNLVNSFSSQPHPENLPTGEGPYRGLIVTTADGGSACGIGIDVGDGSNRPVGESGWWIGMRLRRGGVLPSGDWKNAYLEDTQQLKIEGSVSNLHRYGGIKLGPRADGTGINFTYGLNTLGARFQESNAINLDIDHRIYWGPVAGVTKWIGYEDATGAFNFRNMNISINSTKVLSVRQTGIFQLGGTADGTVKNTETMTLVELARYVKNYLML
Physico‐chemical
properties
protein length:452 AA
molecular weight: 47870,00570 Da
isoelectric point:6,46921
aromaticity:0,08628
hydropathy:-0,26903

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage nieznany
[NCBI] 		2696432 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009986346.1 [NCBI]
Genbank nucleotide accession
NC_052659.1 [NCBI]
CDS location
range 115613 -> 116971
strand -
CDS
ATGTCAACTACAATTACTAATTTACCCGAAACATCAAAAGTTAATGGTTCAGATTACCTGGTTTTAGATCAACCTGATAAGACTGTTAAAAGCACAGTTTCCAACTTTCTTACTGACACTGGGGTGGTTTTAGCCACCCAGTTGAAAGATTCAGGTGGGGCTGGTCTTATTGGTGATATTCCAAAACCAATTACGTGGGGTGGGTTCGCTGGCGGAGCCAAAGGGGATTCCGAATCCAATACGGTAGCTATTACTGCCGCGAACAACACGGGCCTTACCTACCTTGTCCCAGAAGGGTATTGGCCCAATACTGTTGATGCAACGTTTAATATATATCCTTCGTTTAGGAACTATTCTGGTGGGTTCAAATTAAAGCGCGGTTTACCCGGAGCCGGAGCCGAAAACCCTTACCCATTAATCTGGGCAGAAAAAACCTCCAAGATGAAAAGGGAAGAGGGGGGCACAAAATGGTTTGATGTTGCTATGCAGGGAACGATAACCCTTGAACCGGAGGCGTCAGCCTTTGGGATTGGTGTCTCGGGCTATGTAAGATCTTCGGCTGGTGATGTATTAACCTCTGGAAAATCAGTTGACGCTATAGGCGTACATGGTTCTGGTAAAGCTATAGGACGAAACGGGAGGGTTTGGGGTCTTTGGGGTCAGGCAGGGAATGGTAATGATGGCTCTGGAGTGCGCTCTTCTCAGTTAGTCGGATGTGAATTAAATCTGGTGAATTCATTCTCATCTCAGCCTCATCCGGAAAACCTTCCCACAGGGGAGGGGCCTTATCGAGGTCTTATCGTTACTACTGCGGACGGTGGTTCAGCTTGTGGTATTGGAATTGACGTTGGAGATGGCTCAAACCGTCCAGTAGGAGAGTCTGGCTGGTGGATAGGCATGAGGCTTAGAAGGGGTGGTGTGCTCCCTTCCGGAGATTGGAAAAATGCTTATTTGGAAGATACTCAACAGCTGAAAATCGAAGGGTCAGTGTCTAACCTTCATCGTTATGGAGGAATAAAACTTGGTCCACGGGCTGACGGAACTGGAATCAACTTCACATATGGTCTGAACACTCTTGGTGCGAGATTTCAAGAAAGTAATGCAATAAACTTAGATATAGACCATAGGATTTACTGGGGTCCGGTCGCCGGAGTAACGAAGTGGATTGGTTACGAAGATGCGACAGGTGCATTTAACTTCAGAAATATGAACATATCTATAAACAGCACTAAAGTTCTTTCAGTCAGACAAACTGGAATTTTCCAGCTAGGTGGAACAGCGGATGGCACGGTCAAAAATACCGAAACAATGACGCTGGTAGAATTGGCCAGATATGTAAAAAATTATCTGATGCTCTAA

Tertiary structure

PDB ID
9bc62dde6ea8565db8d17f681b8c7f541b4f6ba3654a25b5e5939d9690780f56
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5219
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment Olsen,N.S., Forero-Junco,L., Kot,W. and Hansen,L.H. 2020 — GenBank