Protein

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Genbank accession
APQ42525.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence Phold
Probability 1,00
Protein sequence
MTLVSGLLSTVTTEASAVTQVEISINTHRTTGTGLMTAEQKMVAVTGGNFSSQIAPGNAAIALIIAGRKSAPIPILVDDVDTQTLAQVIDAARLATGETQESLAAFVQQVLAVRQEVLGVADDVTTEKNAALSGISTLRDSALGAINNASGGSLTQINTARSDALNQINQNSASALTDVGTAKNTALTEIGMEVARAEDAADRAESAVNDGVGDGSVTLAKLAQDVKDQIGAKAEMSEVEQALEAKPDPDTVAMMISQAIAGLVGSAPQALDTVYELAAYLTDPGVASGLVQQLAGKAPTSHDHTMAQISNLPTVTASATGSALVQRWSTGQISVPTTPDNASAASSKAYIDLEAGKRILKSGTAATVWSGTQAQYDALTNAVKNAAGFIAVITA
Physico‐chemical
properties
protein length:395 AA
molecular weight: 40114,40580 Da
isoelectric point:4,50178
aromaticity:0,02278
hydropathy:0,08734

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Corynebacterium phage phi16
[NCBI] 		1927022 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APQ42525.1 [NCBI]
Genbank nucleotide accession
KY250482 [NCBI]
CDS location
range 19360 -> 20547
strand +
CDS
ATGACTTTGGTTTCTGGTCTGCTTTCGACCGTGACCACTGAGGCTAGTGCGGTCACCCAAGTAGAAATCTCAATAAACACCCACCGCACCACCGGCACTGGGCTGATGACTGCAGAGCAGAAAATGGTGGCAGTCACAGGTGGAAACTTTTCCTCCCAAATCGCGCCGGGAAATGCGGCGATAGCGCTTATTATCGCGGGCCGTAAGTCTGCCCCGATCCCTATTCTGGTGGACGACGTAGATACGCAGACTCTCGCTCAGGTGATCGATGCAGCAAGATTGGCTACTGGTGAGACGCAGGAATCCCTGGCAGCTTTTGTACAACAAGTTTTGGCGGTGCGTCAGGAGGTTTTAGGTGTTGCCGACGATGTAACCACGGAGAAAAACGCGGCATTGTCTGGGATTAGTACACTTCGTGATTCAGCTTTGGGGGCGATTAATAACGCGAGTGGTGGGTCACTGACCCAAATAAACACTGCTCGAAGTGACGCGCTAAACCAGATTAATCAAAACTCCGCTTCGGCGCTAACTGACGTAGGCACTGCTAAAAACACTGCTCTCACGGAGATTGGGATGGAGGTCGCCAGGGCCGAGGATGCTGCTGACCGCGCTGAGAGTGCGGTGAATGATGGTGTGGGTGATGGTTCCGTCACGCTCGCAAAATTAGCTCAAGATGTCAAAGATCAGATCGGCGCTAAAGCTGAGATGTCGGAGGTGGAGCAGGCTCTTGAGGCTAAGCCTGATCCGGATACGGTCGCGATGATGATCAGCCAAGCGATCGCAGGCTTGGTGGGATCAGCACCTCAAGCGCTCGATACGGTCTATGAGCTGGCAGCGTATTTGACCGATCCTGGTGTGGCGAGTGGCCTGGTGCAGCAGCTCGCAGGGAAAGCACCGACCTCGCATGATCATACGATGGCACAGATCTCGAATCTGCCGACGGTGACAGCATCAGCCACTGGAAGTGCGCTTGTCCAGCGCTGGTCTACCGGCCAGATCTCGGTGCCTACGACGCCGGATAATGCGTCCGCCGCATCATCGAAAGCGTATATCGATTTGGAAGCCGGTAAGCGCATCCTCAAATCGGGCACGGCTGCGACTGTGTGGTCTGGTACGCAGGCGCAATACGATGCGCTGACCAATGCTGTGAAAAATGCTGCTGGTTTTATCGCGGTGATCACAGCATGA

Tertiary structure

PDB ID
91e695aed65ce34d625463c5cac28b0c2fecec6f63ca16b5e38193bd388aa772
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8181
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete nucleotide sequence and annotation of the temperate corynephage phi16 genome Lobanova,J.S., Gak,E.R., Andreeva,I.G., Rybak,K.V., Krylov,A.A. and Mashko,S.V. 2017-04-28 — GenBank