Protein

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Genbank accession
AFK66646.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALKLDGIDARLTIPTWGESGDFKINVKFLRTEKFCAILGQDAYSNLHQLYNGKIELNIQGNKVTIDNPPAVGGLFDIWIIRVGNGCTLYVNGEEGYTSCRADRWQVTYFGVHYNGGFSNTWFSDNTFVGQWTFEGATPELNRSYDFEKQYNKDGQPLVYESLKGLSASGFGFGFDSAAAAWGSTPLGSEDIGGDTGGSGDTKEFDELKTYPLGAIVISDMVWVDSKNTWYCVTYSNDANGGTIEKFDKDWNHLGTSHTGIKEYLLSITYDPITNLLYVGSNTGGAYSVSLIDNSSLGSFISLGTSTNSYALEVIGTDTYALDLTSLAIRNTGQSFSANGTTVFSINSISPTNIIDMSWDGEFWNLNSWDNVIRRYDSSWNLVKDIPITLTDSAAKLRRFYYVNNRWWARDSVSNSIIELAGKTSDIDGNLVGTINLLQWGGKDILDVLYSNVLGNYETVQMNLGSVAVWREGTNSVTKVAKSLPYERSGFDGTHLYEGIDQSMYVDDISVDIITIVQHSLSAGIDNVSQSMDVDDISLDIYTITQQSLSAGIENVSQSMNASGIVVDVITIIQQALSAGIENIGQSFTAGIGVTIE
Physico‐chemical
properties
protein length:597 AA
molecular weight: 65304,64710 Da
isoelectric point:4,38470
aromaticity:0,11055
hydropathy:-0,14724

Domains

Domains [InterPro]
SSF63829
214–435
SSF63829
AFK66646.1
1 597
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Colwellia phage 9A
[NCBI] 		765765 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Colwellia
[NCBI] 		28228 Bacteria > Proteobacteria > Gammaproteobacteria > Alteromonadales > Colwelliaceae >
Host Colwellia psychrerythraea 34H
[NCBI] 		167879 Bacteria > Proteobacteria > Gammaproteobacteria > Alteromonadales > Colwelliaceae > Colwellia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFK66646.1 [NCBI]
Genbank nucleotide accession
HQ317390 [NCBI]
CDS location
range 31704 -> 33497
strand -
CDS
ATGGCTTTAAAATTAGATGGCATTGATGCACGATTGACAATCCCCACATGGGGAGAGTCAGGTGACTTTAAAATAAATGTAAAATTTCTTAGAACTGAAAAGTTTTGTGCTATACTTGGACAAGATGCTTATTCTAACTTACACCAACTTTACAACGGTAAGATTGAATTAAATATTCAAGGTAATAAGGTTACCATAGATAATCCACCTGCAGTCGGTGGGTTATTTGATATATGGATTATCCGTGTAGGTAATGGATGTACATTGTACGTAAATGGTGAAGAAGGTTACACAAGCTGTAGGGCTGATAGGTGGCAGGTAACTTATTTTGGTGTGCATTATAATGGTGGATTTTCCAATACATGGTTCTCAGATAATACCTTTGTTGGTCAGTGGACTTTTGAAGGTGCCACACCTGAATTAAATAGATCCTATGACTTTGAAAAGCAGTACAATAAGGACGGTCAACCGCTTGTTTATGAATCACTAAAAGGTTTATCAGCAAGTGGCTTTGGATTTGGCTTTGATAGTGCAGCAGCAGCATGGGGATCAACTCCTTTAGGTTCTGAAGATATCGGTGGTGACACTGGTGGTAGTGGTGATACTAAAGAGTTTGATGAATTAAAGACATACCCTTTAGGTGCGATAGTTATAAGTGACATGGTGTGGGTAGATTCAAAAAACACTTGGTACTGTGTTACGTATAGTAATGATGCAAATGGTGGTACTATTGAAAAATTTGATAAAGATTGGAACCATCTAGGTACATCACATACTGGTATAAAGGAATACCTTTTATCAATAACTTATGACCCGATAACAAACCTTCTTTATGTAGGATCAAATACGGGTGGTGCTTACTCGGTATCCTTGATAGATAATAGCTCACTTGGCTCATTTATATCATTAGGGACATCTACAAACTCTTACGCACTTGAAGTTATTGGAACTGACACATACGCTCTTGACTTGACAAGCCTAGCTATACGTAACACAGGGCAAAGTTTTTCTGCCAACGGCACTACTGTATTTTCAATAAATTCAATATCACCTACCAATATAATTGATATGTCTTGGGATGGAGAATTTTGGAATCTAAATTCTTGGGACAATGTAATTAGGCGCTATGACTCAAGTTGGAACCTTGTAAAAGATATACCTATTACTTTAACTGACAGTGCAGCCAAGCTTAGAAGATTTTACTATGTAAATAATAGGTGGTGGGCTAGGGATTCTGTAAGTAATTCAATTATAGAACTGGCAGGTAAGACCTCAGATATTGATGGTAATTTAGTTGGAACCATAAATCTTTTACAATGGGGTGGTAAAGATATACTAGATGTATTATACTCCAACGTGTTAGGTAATTATGAAACTGTACAGATGAATTTAGGTTCAGTAGCGGTATGGCGAGAAGGTACTAATAGTGTAACTAAAGTAGCTAAAAGTTTACCTTATGAACGTAGTGGATTTGATGGTACTCACTTATATGAAGGTATTGATCAAAGTATGTATGTAGATGATATATCTGTAGATATTATAACAATCGTACAGCACAGTTTAAGTGCAGGTATTGATAATGTTAGTCAAAGTATGGATGTAGATGATATTAGTTTAGATATCTATACAATAACCCAACAAAGTTTAAGTGCAGGTATTGAGAATGTTAGCCAAAGTATGAATGCTAGTGGTATAGTTGTAGATGTTATAACAATAATCCAACAAGCGTTAAGTGCAGGTATTGAGAATATTGGTCAAAGCTTTACAGCAGGAATCGGTGTTACTATTGAATAA

Tertiary structure

PDB ID
44004b5bfc883909857ca4919cdb9fff536446f8e099800e465c324007f59b7c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5903
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Collwellia phage 9A Henn,M.R., Deming,J., Carpenter,S., Colangelo-Lillis,J., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Fitzgerald,M.F., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank