Protein

View in Explore
Genbank accession
AVP40079.1 [GenBank]
Protein name
putative tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLSDPVSGIRRRPPGEIVWESTIDNPGLDSLFTEYVERGTDGRHLLINTSNGNWWLLAKNGKTILNSGNDPYFVTTVGQTSLQTASIAGLTYILNTEMSPNTTVDNTGRIDPSTTGFFYVKSAAFQKRWNVTITSAGVDYSGDYTAPAAGSTSGNAEEVSGAYVAQQLRDSLVANGLPAGNVSVRGAYLFFYGLSNCVVSSDAGDTYAVVSNQSRVDQEQDLPAQLPAQADGAMCRVGTASSETAWYQFNYNTRTWSEVGAYGSITKITNMPRELAADDNIIARDWEGRLAGNDDNNSNPGFVENGYITGIAAFQGRLVLLSGSSVDMSASGLYQRFYRSTVTSLLDTDRISISSASAQDSVYRTAVQFNRDLVLFANSMQAVVPGSAVLTPTNASISITSTYDCDSRVTPVMAGQTVIYPNKRNDSYAGILELIPSPYTAAQYTTQDATVHLPRYIPGRVLQMQNSSVTNMAFSRMSGERNSLLVYEFMWGGSDGAKMQAAWHKWSFPYPILSVQALEDEVFLYMQGPSPGNKLLIVSMDPREGYQLGMEYRGAYSDLQKQVQVQDGVFTVPEVLRPVGWADSYKDDLILTYLSSDSMGPTEVGIKEIAGENTLRVVRGVPDGTYVIGRRYRSTLTLTTPILRDQNDKLVGSGHVRLLRLDVAVRNSGHFDVQVLDTPRDVNWGGELTGILMNSKELTLGQALRMDLATITVPCRTNADTTEVTLFTEGSMELNVLDISYILRYNQRRRRI
Physico‐chemical
properties
protein length:752 AA
molecular weight: 82369,25380 Da
isoelectric point:4,98980
aromaticity:0,08910
hydropathy:-0,24069

Domains

Domains [InterPro]
IPR058003
2–752
IPR058003
AVP40079.1
1 752
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage myPSH1235
[NCBI] 		2099390 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVP40079.1 [NCBI]
Genbank nucleotide accession
MG972768 [NCBI]
CDS location
range 20971 -> 23229
strand +
CDS
ATGCTCAGCGACCCGGTTTCCGGTATCCGCCGCAGACCTCCTGGTGAGATTGTATGGGAAAGCACAATCGATAACCCTGGGCTTGATTCCCTGTTCACTGAATACGTAGAGCGTGGGACTGACGGTAGGCACCTGCTGATTAACACCAGCAACGGTAACTGGTGGTTGCTGGCTAAGAATGGAAAGACCATCCTTAATTCCGGCAATGACCCGTACTTTGTTACCACCGTAGGCCAGACCTCTTTGCAGACCGCAAGTATTGCTGGATTGACTTATATCCTGAATACTGAGATGTCTCCGAACACAACCGTGGACAATACTGGGCGCATCGACCCCAGCACCACCGGGTTCTTCTACGTTAAATCCGCAGCATTCCAGAAACGCTGGAACGTCACCATTACCTCTGCGGGGGTAGACTACTCAGGGGACTACACCGCCCCAGCTGCTGGTAGCACCAGCGGCAACGCTGAGGAGGTATCAGGTGCCTACGTTGCCCAGCAGCTGCGAGACTCTCTTGTAGCGAATGGGTTGCCAGCTGGGAATGTGAGCGTACGTGGCGCGTACCTGTTCTTCTACGGGTTGAGCAACTGCGTGGTATCCTCTGACGCGGGTGATACTTACGCTGTGGTGTCCAACCAGTCTCGTGTAGACCAGGAGCAGGACCTGCCTGCACAGCTCCCAGCGCAAGCTGACGGAGCAATGTGCCGTGTAGGTACCGCCTCGTCTGAGACAGCATGGTACCAGTTCAACTACAATACCCGCACCTGGTCTGAGGTGGGGGCGTACGGCAGCATCACCAAGATTACGAACATGCCTAGAGAGCTCGCCGCGGATGACAACATCATTGCGCGCGATTGGGAGGGGCGCTTAGCTGGTAACGACGATAACAACAGTAATCCCGGATTCGTCGAGAATGGCTACATCACTGGTATTGCAGCTTTCCAGGGGCGCCTGGTTCTGCTTAGCGGCAGCTCTGTGGATATGTCCGCCTCGGGCCTGTATCAGCGCTTCTACCGCTCCACTGTGACGTCACTGCTGGATACGGACCGTATCAGTATTAGCTCTGCGTCTGCACAGGATTCTGTGTACCGTACCGCTGTACAGTTTAACAGGGACCTGGTCCTGTTTGCTAACAGTATGCAGGCGGTTGTGCCGGGTTCGGCAGTACTTACGCCAACTAACGCAAGCATTAGTATTACCAGCACCTATGATTGTGACAGCCGTGTGACTCCGGTAATGGCGGGGCAGACAGTAATATACCCGAACAAGCGCAACGACAGCTACGCCGGTATTCTGGAGTTAATCCCGTCGCCGTACACCGCTGCGCAGTACACTACGCAGGATGCCACTGTGCACCTGCCGCGGTATATCCCCGGTAGGGTGTTGCAGATGCAAAACTCCAGCGTCACCAATATGGCCTTCTCGCGCATGTCTGGAGAGCGAAATAGCCTGCTGGTATACGAGTTCATGTGGGGCGGAAGTGACGGCGCTAAGATGCAGGCGGCGTGGCATAAGTGGTCGTTCCCGTATCCAATACTGAGCGTGCAGGCGCTGGAGGATGAGGTATTCCTGTACATGCAAGGGCCCAGTCCCGGCAACAAGCTCCTGATTGTGTCTATGGACCCGCGTGAGGGTTATCAGTTGGGTATGGAGTATCGCGGGGCGTACTCGGATTTGCAAAAGCAAGTTCAAGTGCAGGACGGGGTGTTCACTGTTCCAGAGGTACTGCGCCCAGTCGGGTGGGCTGACAGTTACAAGGATGACCTTATCTTAACTTATCTGTCCAGCGACTCTATGGGGCCTACCGAGGTTGGCATCAAGGAGATTGCAGGGGAGAACACCCTGCGGGTTGTGCGCGGCGTACCTGATGGTACCTACGTAATCGGGCGGCGTTACCGCAGTACGTTAACGCTAACTACGCCTATTCTTCGGGACCAGAATGACAAACTCGTGGGAAGTGGGCACGTGCGCCTGCTACGATTGGACGTGGCGGTACGTAACTCCGGGCACTTCGATGTACAGGTACTGGACACCCCGCGCGACGTCAACTGGGGTGGGGAACTAACTGGTATCCTGATGAACTCAAAGGAGCTGACGCTTGGGCAGGCCCTGCGTATGGACTTGGCTACGATTACCGTGCCATGCCGTACTAACGCAGACACAACCGAGGTAACGCTGTTTACTGAGGGCTCTATGGAACTGAACGTGCTGGATATATCATACATCCTGCGCTATAACCAACGCAGACGGAGAATTTAA

Tertiary structure

PDB ID
bf3ccf0863be77c76aecfd49d7eb0aba8a659515c5c18dd1924b565569f4de1f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8832
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Therapeutic Characterization of Lytic Bacteriophages against Klebsiella pneumoniae Ramesh,N., Prasanth,M., Tamhankar,A.J. and Lundborg,C.S. 2021-10-13 — GenBank