Protein
View in Explore- Genbank accession
- XCG96021.1 [GenBank]
- Protein name
- tail spike protein
- RBP type
-
TSP
- Protein sequence
-
MALVSQSIKNLKGGISQQPEILRYPEQGSFQVNGWSSETEGLQKRPPMVFIKSLGGRGYLGEDPYIHLINRDEYEQYYAVFTGNDVRVFDLSGYEYQVRGDRSYVTVNNPKDNLRMVTVADYTFIVNRTRQVRESQHLTNGGTFRDNVDALINVRGGQYGRKLEVNINGVWVSHQLPPGDNAKDDPPKVDAQAIAEALATLLRAAHPTWTFNVGTGFIHCIAPADTTIDILETKDGYADQLINPVTHYVQSFSKLPLNAPDGYMVKIVGDTSKTADQYYVKYDKSQKVWKETVGWNISVGLEYHTMPWTLVRAADGNFDLGYHDWKDRRAGDDDTNPQPSFVNSTITDVFFFRNRLGFISGENIVMSRTSKYFEFYPPSVANYTDDDPLDVAVSHNRVSVLKYAVSFAEELLLWSDEAQFVLSANGVLSAKTAQLDLTTQFDVSDRARPYGIGRNIYYAAPRSSFTSIMRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSINGSGTENFACVLTKGAPSKVFIYKFLYMDENIRQQSWSHWDFGEDVEVMAASCINSTMYMLMRNGYNVWIAAVDFKKESTDFPFEPYRFHVDSKRSYHISETAYDIETNQTVVNVKDIYNASFDKGTVAICESDGKITEYEPTGDSWDSTPDIRISGDVSGKDIVIGFLYEFRYVFSRFLIKQEQNDGTTSTEDSGRLQLRRAWVNYQDTGAFTVSVDNGNREFNYLVNARVGSTGLRLGQKATTTGQYRFPVTGNALYQEVSLSSFNASPVSIIGCGWEGNYTNRASGI
- Physico‐chemical
properties -
protein length: 791 AA molecular weight: 89015,06040 Da isoelectric point: 5,22546 aromaticity: 0,12389 hydropathy: -0,41201
Domains
Domains [InterPro]
IPR058003
1–791
1–791
1
791
Legend:
Pfam
SMART
CDD
TIGRFAM
HAMAP
SUPFAM
PRINTS
Gene3D
PANTHER
Other
Taxonomy
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
XCG96021.1
[NCBI]
Genbank nucleotide accession
PP848839.1
[NCBI]
CDS location
range 26829 -> 29204
strand +
strand +
CDS
ATGGCTCTCGTATCGCAATCAATAAAAAACCTTAAGGGAGGCATTAGCCAACAGCCTGAAATCCTACGGTACCCAGAGCAGGGTTCGTTTCAGGTCAACGGTTGGTCCTCCGAGACTGAGGGTCTCCAGAAGCGACCACCCATGGTGTTCATCAAATCCTTAGGAGGCCGTGGGTATCTTGGGGAGGACCCCTACATTCACCTAATCAACCGCGATGAATACGAGCAGTATTACGCCGTGTTCACAGGGAATGACGTTCGGGTATTCGACCTGTCCGGCTATGAGTATCAGGTCCGAGGGGACCGCTCGTATGTGACCGTCAATAACCCTAAGGACAACTTGCGGATGGTCACAGTGGCCGACTACACGTTCATCGTGAATCGCACCAGACAGGTCCGAGAGAGTCAGCACTTGACCAACGGTGGTACCTTCAGAGATAACGTGGACGCCCTCATTAACGTTCGCGGTGGCCAGTACGGTCGTAAGCTCGAAGTGAACATTAACGGCGTCTGGGTAAGCCACCAGCTCCCTCCGGGTGACAACGCTAAGGATGACCCACCTAAGGTAGACGCACAGGCTATCGCTGAGGCTCTAGCTACTCTCCTCAGAGCGGCACATCCTACGTGGACGTTCAATGTGGGAACAGGGTTCATTCACTGTATTGCTCCCGCAGATACCACCATTGACATCTTGGAGACAAAGGATGGCTACGCGGACCAGCTTATTAACCCAGTGACACACTACGTCCAGAGCTTCTCTAAGTTACCTCTGAACGCCCCAGATGGGTACATGGTGAAGATTGTTGGTGACACATCTAAGACCGCCGACCAGTATTACGTTAAGTACGACAAGAGTCAGAAGGTCTGGAAGGAAACTGTCGGTTGGAACATTTCGGTCGGCCTTGAGTACCACACGATGCCTTGGACACTGGTTCGTGCAGCTGACGGTAACTTTGACCTCGGGTACCACGATTGGAAGGACCGACGTGCAGGCGATGATGATACTAACCCTCAGCCGTCCTTTGTCAACTCAACGATAACCGACGTGTTCTTCTTCAGGAACCGCTTAGGGTTCATCTCTGGGGAGAACATTGTGATGTCCCGCACCAGTAAATACTTTGAGTTCTACCCGCCGTCAGTGGCCAACTACACGGATGATGACCCGCTGGACGTTGCCGTGAGTCATAACCGTGTGTCGGTCCTTAAGTACGCTGTGAGCTTCGCAGAGGAGCTGCTGCTATGGTCTGATGAGGCGCAGTTCGTTCTGTCTGCAAACGGTGTGTTATCCGCTAAGACTGCACAGCTGGACCTGACCACTCAGTTCGATGTGTCAGACCGCGCGCGTCCTTATGGTATCGGTAGGAACATCTACTATGCAGCCCCTCGCAGCTCCTTTACGTCCATCATGCGTTACTACGCGGTACAGGATGTAAGCTCTGTGAAGAACGCCGAGGACATGACGGCCCACGTTCCGAACTACATCCCTAACGGTGTGTTCAGCATCAATGGCTCTGGTACGGAGAACTTTGCGTGTGTGCTCACCAAGGGTGCGCCAAGCAAGGTTTTCATCTACAAGTTCCTGTACATGGATGAGAACATCCGCCAGCAGTCATGGTCACATTGGGACTTCGGTGAGGATGTGGAGGTGATGGCCGCTAGTTGTATCAACTCGACGATGTACATGCTGATGCGCAATGGCTACAACGTATGGATTGCTGCGGTTGACTTCAAGAAGGAGTCTACAGACTTCCCATTCGAGCCTTACCGTTTCCACGTTGACTCCAAGCGCTCGTACCACATCTCAGAGACAGCGTACGACATTGAGACCAACCAGACGGTAGTAAACGTCAAGGACATATACAATGCGTCCTTCGATAAAGGCACGGTGGCCATTTGTGAGAGTGACGGTAAAATCACCGAGTACGAACCTACGGGAGACTCTTGGGATTCCACACCAGACATTCGAATCAGCGGCGACGTTTCCGGTAAGGATATCGTTATTGGGTTCCTATACGAGTTCCGGTACGTATTCAGTCGGTTCCTTATCAAGCAGGAGCAGAACGATGGTACAACGTCCACTGAGGACTCTGGTCGCCTACAGCTGCGCAGAGCTTGGGTGAACTATCAGGACACTGGAGCGTTCACTGTGAGTGTCGATAACGGCAACCGTGAGTTCAACTATCTGGTCAACGCCAGAGTGGGTTCTACTGGTCTACGTCTGGGCCAGAAGGCCACGACCACTGGTCAGTACCGTTTCCCGGTGACAGGTAACGCACTGTATCAGGAGGTGTCCTTGAGTTCCTTCAACGCTTCCCCTGTGTCAATCATTGGGTGTGGCTGGGAGGGGAACTATACCAACCGCGCCAGCGGTATTTAA
Tertiary structure
PDB ID
eaa05ab698f76cef89b7643e680333d49cd51c4e8f9a478616440becfee41191
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50