Protein

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Genbank accession
QIG65375.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,64
Protein sequence
MSCKYDIIDEDGRKRVRALRHFTVQGRDVCPMELGGYVYDANTLSQDGNCWIFSGSLEYPGVRVMDEAIVDMGNNLPKDTARPKATIISGNSRIMGAISFETQSFDTAQTPAMFEQGGYTATVGMTPVKASDGSRIRIAAALFGGSVGKVAVTSASYEARIISLDSDGLVMDGGTWTAGGPAVTLTTTSPYFLVEVRKTPIGAAITPADVTEAGVTITQAREATVRIFNSSIVPVYNGSVTLATNILRYEVTDLSRKPYQVNIQNSYLRIECSFNKQNTVRANADFTKVNYNLVLSPSAAHYISGTYRNTNINTPASVNVARHDKSIFDVSDCPDFEFSTVTFPDLAAMYASGKTFYFRGCNMPAGSAIHYYDPKVNTWDNIDFTKAMADLGKEAFVGTTIISSNVQGMYRAKGNASGTIGGLLEAASSFDNAVYDGTAGATYDCITYKDCVVKGKFTLRGRCVFGGTPGGASRITNTQATAMVVDGNFRIDGNAQVTDTSLRGTGYIGGNAELKNGSVEGYIYMDGNAKYIPAVVANPPIIRRLIMSGNAKVLKQRDAASGVMNLVMSDNAVLDAAIGFVGEMIMRDDSRIVRADANSAATVYGKLVLKDRARVEGTASVDIRGEITLVGNFAASGARTITGKRTISDVSEITAVELPMTKKTW
Physico‐chemical
properties
protein length:665 AA
molecular weight: 71200,70840 Da
isoelectric point:7,46713
aromaticity:0,08271
hydropathy:-0,09398

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteroides phage SJC18
[NCBI] 		2710515 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG65375.1 [NCBI]
Genbank nucleotide accession
MT074156 [NCBI]
CDS location
range 2477 -> 4474
strand +
CDS
ATGAGTTGTAAGTATGACATTATTGACGAAGACGGGCGTAAACGCGTAAGAGCGTTGCGCCACTTCACGGTACAAGGGCGGGACGTTTGCCCTATGGAGCTAGGCGGATACGTCTACGATGCTAATACGCTGTCACAGGACGGTAACTGTTGGATATTCAGTGGAAGCCTAGAATACCCCGGTGTACGTGTTATGGACGAGGCTATCGTGGATATGGGTAACAATCTACCAAAGGACACCGCTAGACCTAAAGCTACTATCATTTCCGGTAATTCCCGTATCATGGGAGCTATCTCGTTTGAAACACAGTCGTTCGACACGGCGCAGACCCCTGCGATGTTTGAACAAGGAGGGTACACTGCCACCGTGGGAATGACACCCGTTAAGGCTTCTGACGGTTCGCGAATCCGAATCGCTGCCGCCCTGTTTGGGGGGTCTGTGGGAAAGGTAGCCGTTACGAGCGCATCGTACGAGGCGAGAATAATCTCTCTTGACTCGGACGGGCTTGTAATGGATGGGGGAACTTGGACCGCAGGGGGTCCCGCGGTTACCCTTACAACGACATCACCCTATTTCTTGGTAGAGGTGAGAAAGACCCCTATTGGCGCCGCTATCACCCCGGCGGACGTGACCGAAGCGGGCGTGACCATAACACAGGCAAGGGAAGCCACGGTACGCATATTCAATTCTTCTATCGTTCCGGTGTATAATGGTTCGGTGACACTGGCAACTAATATCCTACGTTACGAGGTTACAGACCTTAGCAGAAAACCGTATCAAGTAAATATTCAAAATTCGTACCTACGTATCGAGTGTAGCTTTAATAAGCAAAACACAGTGAGAGCGAACGCGGACTTTACAAAAGTTAATTACAATTTGGTGCTGTCACCGAGCGCGGCCCACTATATCTCAGGAACGTACCGTAACACGAACATCAATACTCCGGCTAGTGTCAACGTAGCGAGACACGATAAGAGTATTTTTGATGTATCCGATTGCCCGGACTTTGAGTTTTCGACGGTTACGTTCCCCGACCTAGCCGCTATGTACGCATCCGGCAAGACGTTCTATTTTAGGGGCTGTAACATGCCCGCAGGTTCGGCGATTCACTACTACGACCCGAAGGTGAACACGTGGGATAACATCGACTTCACTAAGGCTATGGCGGACTTAGGGAAAGAGGCGTTCGTAGGTACTACTATCATATCATCCAATGTACAGGGGATGTACCGTGCCAAGGGAAATGCTAGCGGCACAATCGGAGGTCTGCTAGAGGCGGCGTCCAGTTTCGACAACGCGGTCTATGACGGCACGGCGGGTGCGACCTATGATTGTATCACCTACAAGGATTGCGTTGTCAAAGGTAAATTCACGCTCAGAGGCCGCTGCGTATTTGGCGGTACACCGGGCGGCGCATCCCGGATTACCAACACACAGGCAACGGCGATGGTGGTTGACGGAAATTTCCGGATCGATGGGAACGCGCAGGTAACCGATACGTCTCTCAGAGGTACAGGCTACATCGGCGGCAATGCCGAGCTGAAGAATGGAAGCGTAGAGGGATACATTTATATGGACGGGAACGCCAAGTACATTCCCGCCGTTGTGGCGAATCCTCCGATTATTAGAAGATTGATTATGTCCGGAAATGCGAAAGTACTGAAACAACGGGACGCGGCATCGGGAGTAATGAACCTAGTTATGTCGGATAATGCGGTATTAGATGCCGCTATCGGATTCGTGGGAGAAATGATAATGCGGGACGATTCCCGAATCGTGCGTGCAGATGCGAATAGTGCAGCCACCGTCTACGGGAAACTTGTATTGAAAGACCGTGCACGGGTAGAAGGAACTGCGTCGGTAGACATAAGAGGGGAAATAACCTTAGTAGGAAACTTCGCTGCATCCGGTGCAAGAACCATCACAGGTAAGCGAACTATTTCAGACGTCTCAGAGATCACAGCAGTAGAATTACCTATGACCAAAAAGACTTGGTAA

Tertiary structure

PDB ID
9ae158de2378cef757ed9160458cd093e71df865aeab160ca014dd3a2c181321
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4548
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteroides thetaiotaomicron-infecting bacteriophage isolates inform sequence-based host range predictions Hryckowian,A.J., Merrill,B.D., Porter,N.T., Van Treuren,W., Nelson,E.J., Garlena,R.A., Russell,D.A., Martens,E.C. and Sonnenburg,J.L. 2020 — GenBank