Protein

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Genbank accession
YP_013435401.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,77
TF
Evidence RBPdetect2
Probability 0,92
TF
Evidence Phold
Probability 1,00
Protein sequence
MVTKTVIPTDITKLKNESLNKNNNLSDLADRAAAWLNVRPIGSTPLAGDPVGDYDAATKRWVENKINTGTVGPTMSGVMNYGVGDFHLRDSRAYIQPYEVVSDGQLLNRADWPELWAYAQMVGAIDDSVWLGDKFQRGKYSSGNGTTTFRVPDRNGVQSGSVYGLFARGDGGQSSINGAIYESGAPNIVFTSPHTMVTLASAAGQVATIGALQSTTSSDAPAPVGSGGRYINTNFDASRCSSIYGRTVSELRPNNFIGVWVIRASGGFVAAKTSWSVISGDAVKPNTGTTVYGGSVLSEYKVGTSSEAVSTLRAKATIGGTYSTELLIDNKSTGKSNSAQLVDNGDFVTDRFKARLVTGMAWSQTGWVQGTLSQNEVNIGSTFNFNSILSGSQSSSAGYKTSAHFGLIHNDLGSFADSCWQVAGDDDNKFGVRLKIQPNNNSIYFYSWWPGASATYTLQLNAVSDSRLKHDIKAIDATKSIEVLKGLEFQSFVYNNDEKSRVRRGVIAQQVETIEPLYVKTRRFYNDDGIEQEQKELDTTPMLLDTMHVVQDLIKRIEDLEKELEQLKVQLVSQ
Physico‐chemical
properties
protein length:574 AA
molecular weight: 62300,64280 Da
isoelectric point:5,82045
aromaticity:0,08885
hydropathy:-0,33293

Domains

Domains [InterPro]
Coil
11–31
Coil SSF88874 IPR030392 Coil
IPR030392
464–564
IPR030392
YP_013435401.1
1 574
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage IrisVonRoten
[NCBI] 		2852004 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_013435401.1 [NCBI]
Genbank nucleotide accession
NC_130053.1 [NCBI]
CDS location
range 25027 -> 26751
strand +
CDS
ATGGTAACTAAAACAGTAATTCCTACGGATATTACAAAACTTAAAAATGAGTCACTTAATAAAAATAATAACCTGAGTGACTTAGCAGACCGTGCAGCAGCGTGGCTAAACGTGCGTCCTATTGGGTCCACCCCTCTTGCGGGGGATCCTGTTGGGGACTATGATGCCGCAACTAAACGTTGGGTAGAGAATAAGATTAACACTGGTACAGTTGGACCCACTATGAGTGGTGTTATGAACTACGGTGTTGGTGATTTTCACCTCCGAGATAGTCGTGCGTATATTCAACCATACGAAGTCGTTTCTGACGGACAGCTTCTTAATAGGGCTGACTGGCCTGAACTTTGGGCGTATGCACAAATGGTTGGGGCTATAGATGATTCAGTTTGGTTAGGAGATAAATTCCAGCGCGGTAAGTACTCATCAGGGAATGGAACAACAACCTTTCGTGTTCCAGATAGAAATGGTGTGCAGTCTGGTTCAGTATATGGTCTATTTGCTCGTGGTGATGGTGGTCAAAGTAGTATTAATGGAGCAATTTATGAATCTGGTGCACCTAATATAGTTTTTACTTCTCCGCATACTATGGTAACGCTTGCTTCAGCAGCTGGCCAAGTTGCAACAATTGGAGCGTTACAATCAACCACGTCAAGTGATGCTCCGGCACCAGTAGGTTCTGGTGGTAGGTACATTAATACAAATTTTGATGCGTCAAGATGTAGTTCTATATACGGGAGAACGGTATCCGAACTACGCCCTAATAACTTCATTGGCGTCTGGGTAATCCGTGCTTCTGGTGGGTTCGTGGCTGCAAAGACTTCGTGGAGTGTTATTAGTGGTGATGCTGTCAAACCTAATACTGGTACTACTGTTTATGGCGGGAGTGTACTATCTGAGTATAAAGTAGGTACTAGTAGTGAGGCTGTAAGTACACTACGAGCTAAAGCTACTATTGGTGGCACCTACTCTACTGAACTACTAATAGACAATAAATCTACCGGTAAATCGAATTCCGCCCAGCTTGTAGATAATGGAGATTTTGTAACGGATCGTTTTAAAGCTAGATTAGTTACTGGCATGGCGTGGTCTCAGACTGGCTGGGTACAAGGTACTCTTTCTCAGAACGAGGTCAATATAGGTAGTACATTTAACTTTAATAGTATATTGAGCGGTTCCCAGTCTTCTTCCGCAGGGTATAAGACATCTGCACATTTTGGATTAATTCATAATGACTTAGGCTCATTTGCAGATTCTTGTTGGCAGGTAGCGGGAGATGATGATAATAAATTTGGTGTGCGTTTAAAAATTCAGCCGAATAATAATAGTATTTATTTTTATTCTTGGTGGCCCGGTGCTTCAGCAACCTATACTTTGCAATTAAATGCTGTATCTGATTCTCGCTTAAAGCATGATATTAAGGCTATAGACGCAACTAAGTCCATCGAGGTATTAAAAGGATTAGAATTCCAATCCTTTGTATATAATAACGATGAAAAATCTCGTGTCCGACGTGGGGTTATTGCTCAGCAAGTAGAGACTATAGAACCACTTTATGTAAAAACTAGAAGATTTTATAATGATGACGGAATAGAGCAGGAGCAAAAGGAATTAGATACAACTCCAATGCTTCTTGACACTATGCATGTTGTGCAAGATCTTATTAAACGGATTGAAGATCTGGAGAAAGAGCTTGAGCAATTAAAGGTACAATTAGTATCACAATAA

Tertiary structure

PDB ID
34d2d5c8b2819643ea1aea7c339db68e18f56988232d929eeedf4b6d80efd927
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6927
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank