Protein

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Genbank accession
SOK58808.1 [GenBank]
Protein name
X-linked retinitis pigmentosa GTPase regulator
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLPFSIISHYGNIIIKSQIKKIVSSYQTIALLYSNGNLYMRGTNQLRAFGIDHASDSLNWVLVKTGVDDVWVGPTHTIIRTSTGEYQCAGYFRPLGYDDSPQGKLWVRYDKLYTLTSTPETTVKQICCGSNSTFILLTNGILYGIGFNNQYWLGADSTYRTTYTQSLSNVRSVHHNTNASFAITNDNKLYGTGNSVNGKLGTNMNTIQQGWTEIALPSPYTYPIQAKEHPTHSLLYASTDSTMQDTRILFCGNTSANPGGRIPAWPNNTVFVFTIGNGGQNGSVQDFATGIVQTVSQTLKSFYYNNSSLYGAGLAGYQMGSSTDRSTGFSTFNLGTEIGSISSAHVVNGCTFILSNNTVYGCGTSTWLGINTYDFIIVSTPE
Physico‐chemical
properties
protein length:382 AA
molecular weight: 41730,10200 Da
isoelectric point:7,62009
aromaticity:0,11780
hydropathy:-0,18482

Domains

Domains [InterPro]
IPR009091
11–261
IPR009091
IPR009091
15–368
IPR009091
IPR051553
65–286
IPR051553
PF13540
123–149
PF13540
SOK58808.1
1 382
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage fHe-Yen9-04
[NCBI] 		2052742 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
SOK58808.1 [NCBI]
Genbank nucleotide accession
LT960551 [NCBI]
CDS location
range 352107 -> 353255
strand -
CDS
ATGTTACCATTTTCAATTATTAGTCATTATGGTAATATAATAATAAAGTCACAGATAAAGAAGATAGTATCTTCATATCAGACGATAGCATTATTATACAGTAATGGTAATTTATACATGAGGGGAACGAATCAACTGAGGGCATTTGGAATAGATCATGCATCTGACAGTTTGAATTGGGTATTAGTCAAGACAGGAGTAGATGATGTATGGGTTGGTCCTACACATACAATAATAAGGACAAGTACAGGAGAATATCAATGTGCAGGATATTTTAGGCCATTAGGATATGATGATAGTCCACAAGGAAAGTTATGGGTTAGGTATGATAAGTTATATACATTAACGAGTACTCCTGAGACTACGGTAAAGCAGATATGTTGTGGATCGAATTCAACATTTATATTATTAACTAATGGTATATTATATGGTATAGGGTTTAACAATCAGTACTGGTTAGGAGCTGATTCTACCTATAGGACTACATACACACAATCATTAAGTAATGTACGGTCAGTACATCATAATACGAACGCTTCATTTGCTATAACGAATGACAATAAGTTATATGGTACAGGGAACAGTGTTAATGGTAAGTTAGGGACGAATATGAATACTATTCAACAAGGCTGGACAGAGATAGCATTACCATCTCCTTATACATATCCTATACAAGCGAAGGAGCATCCTACACATAGTTTACTATATGCTAGTACTGACAGTACGATGCAGGATACAAGGATATTATTTTGTGGCAATACTAGTGCGAATCCTGGGGGAAGAATCCCTGCATGGCCTAATAACACAGTATTTGTTTTCACCATAGGTAATGGTGGTCAAAATGGTTCAGTACAAGATTTTGCGACAGGTATAGTTCAGACTGTATCACAGACATTAAAATCTTTTTACTATAACAACAGTTCTTTATATGGGGCGGGTCTGGCTGGATATCAGATGGGTAGTAGTACTGATAGGAGTACTGGATTTAGTACATTCAATTTAGGAACAGAAATAGGTTCAATAAGTTCAGCCCATGTAGTAAATGGTTGTACATTTATATTAAGCAATAACACAGTATATGGATGTGGTACTAGCACATGGTTAGGAATAAACACATATGATTTTATTATAGTAAGCACACCAGAATAA

Tertiary structure

PDB ID
501e42d901ba351d0aa65de67c5bda466ec1e0ef55f403162354f430d129a111
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8289
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50