Protein

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Genbank accession
ARM68718.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MPKITGKLETITNAPSAVREVWLRPPSTRPSGTGLIVDEPVRIIINEAGGFTATIAPGAAVLVLVGVDFIARESIPLLIADGMTTIAEAMEAARDFTPDVHDRLAELANEVARGVKSTGDSASAASVDRGRAEAAAQNAKSAQVAAAASEKQTLSAWKQVKSCLEEWEPRVQQLAKWQPQYDWLTGNLEKLVVQATQLVADGVKELTSVVKSDAEAAKRSSTEASQSNLKAQAAAKFAAEAATTAVTTAVNELKGNAPEAFDTLAEIAERIKPGGAIEAEILQKISEKADSGSMAVIKRQLEGLTVASIKGLAEALAGKSAKEHLHGSGAITDAVDPSQEASTRNKNKLVKLNTFGNLSAPSNPRRDTDAVPKKYVDDQVRTVTAQSKQIYEVMQQIPKHAPSSGEYAAKIVDGKLLVKNPQSGDEAASKDYVDRLVGSGMKIQRGNGTDPNTIYFEV
Physico‐chemical
properties
protein length:458 AA
molecular weight: 48471,13340 Da
isoelectric point:5,83523
aromaticity:0,03930
hydropathy:-0,28646

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Corynebacterium phage LGCM-V6
[NCBI] 		1972437 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARM68718.1 [NCBI]
Genbank nucleotide accession
KY624612 [NCBI]
CDS location
range 30222 -> 31598
strand +
CDS
ATGCCTAAAATCACAGGCAAGCTCGAAACAATAACGAACGCCCCGTCGGCAGTGCGGGAAGTGTGGCTAAGACCACCATCCACACGCCCCAGTGGTACGGGTCTGATCGTGGACGAACCAGTACGCATTATCATCAACGAAGCGGGTGGGTTCACGGCAACAATCGCGCCGGGTGCTGCGGTGTTAGTACTCGTTGGAGTGGATTTTATTGCCCGTGAGTCAATCCCCCTGCTAATCGCTGATGGGATGACCACAATCGCGGAGGCGATGGAAGCAGCTAGGGATTTCACACCTGATGTACACGATCGCCTGGCTGAGCTCGCGAATGAGGTGGCCCGTGGCGTGAAATCCACGGGGGACAGCGCCTCAGCTGCGAGCGTTGATCGTGGACGTGCGGAAGCTGCTGCGCAAAATGCGAAGTCCGCACAGGTGGCTGCTGCTGCATCGGAGAAGCAAACATTATCAGCATGGAAACAGGTGAAATCTTGCTTGGAGGAGTGGGAGCCTCGAGTACAGCAACTAGCTAAATGGCAGCCGCAGTATGACTGGCTGACCGGAAATCTTGAGAAGCTGGTGGTTCAGGCTACGCAGCTCGTAGCTGACGGTGTGAAAGAGCTTACTTCAGTAGTAAAAAGCGATGCTGAGGCGGCTAAACGGAGCTCTACTGAGGCTAGCCAGAGTAATCTCAAAGCGCAGGCTGCTGCGAAGTTTGCTGCTGAGGCCGCTACCACGGCTGTGACTACGGCAGTGAATGAGCTCAAGGGTAATGCGCCTGAGGCTTTTGATACCCTTGCGGAGATCGCCGAGCGCATTAAACCTGGTGGCGCTATCGAGGCTGAGATTCTCCAGAAGATCAGCGAGAAGGCTGATTCTGGCTCAATGGCTGTAATTAAACGGCAGCTGGAAGGTTTGACCGTTGCTAGTATCAAGGGGCTAGCTGAGGCTCTCGCCGGAAAATCGGCCAAAGAACATCTACACGGTTCGGGTGCCATTACCGACGCGGTTGATCCGTCCCAAGAGGCTAGCACGAGGAATAAAAATAAGCTGGTGAAGCTGAATACTTTTGGTAATTTAAGTGCCCCATCTAATCCTAGGCGAGACACTGATGCTGTCCCTAAGAAATATGTCGATGACCAAGTACGGACAGTAACGGCGCAGTCTAAGCAGATCTATGAGGTTATGCAGCAGATCCCAAAGCACGCGCCTAGTAGCGGTGAGTACGCTGCAAAGATTGTTGACGGCAAATTGTTGGTTAAGAATCCACAGTCCGGCGATGAGGCTGCCAGCAAGGACTACGTTGACAGACTCGTAGGATCTGGGATGAAGATTCAACGTGGTAACGGTACTGACCCGAACACAATTTATTTCGAGGTGTAA

Tertiary structure

PDB ID
c53c8a18487c391422fbabc5d9bd52cdb64e6b1ed68c3c4503fa62ecadfc924c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7268
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Corynebacterium pseudotuberculosis strain 36 phage sequence LGCM-V6 in tRNA gene Viana,M.V.C., Figueiredo,H., Ramos,R., Guimaraes,L.C., Pereira,F.L., Dorella,F.A., Barh,D., Selim,S.A.K., Salaheldean,M., Silva,A., Wattam,A.R. and Azevedo,V. 2015-08-27 — GenBank